Detailed Information for Phage DoctorPepper |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Emma Kessinger and Luke DeLion |
Year Found | 2023 |
Location Found | West Lafayette, IN USA |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 28°C |
GPS Coordinates | 40.42718 N, 86.91926 W Map |
Discovery Notes | This sample was collected in a mostly dry soil sample after digging about 3 inches deep. The weather was 71 degrees and partly cloudy when the sample was collected at 7:17 am. There was 90% humidity, and the wind speed was 6 mph. There was 0” of rain in the last 24 hours. |
Naming Notes | This name came from my love for science. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 2, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 919 |
Genome length (bp) | 54243 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGACCT |
GC Content | 51.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AW |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Purdue University |
Annotation Status | In GenBank |
Number of Genes | 86 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ184801 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
187 |
Pitt Freezer Box Grid# |
E9 |
Available Files |
GenBank File for Phamerator | Download |