Detailed Information for Phage ProfFrink |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Megan Dennis |
Year Found | 2021 |
Location Found | Poughkeepsie, NY USA |
Finding Institution | Marist College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 41.694711 N, 73.91285 W Map |
Discovery Notes | Damp soil from surface to approximately 1 inch below surface, soil is dense/full of clay, a few spruce needles were present in the direct isolation. Collected in early August one day after rain, air temperature approx 80F. |
Naming Notes | Named after Springfield's best mad scientist & nerdy professor. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 11, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1036 |
Genome length (bp) | 54478 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGACCT |
GC Content | 51.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AW |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Marist College |
Annotation Status | Awaiting_QC |
Plaque Notes | Plaques are clear, approximately 1mm in diameter |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.7 x10^10 pfu/ml |
Pitt Freezer Box# |
134 |
Pitt Freezer Box Grid# |
H7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |