Detailed Information for Phage DrWorm |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Illyannah Eberhardt, Kalei Martin, Melissa Emerson |
Year Found | 2022 |
Location Found | Edmond, OK USA |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 35.658979 N, 97.456242 W Map |
Discovery Notes | It was very dry soil |
Naming Notes | There was a worm in our sample. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 31, 2023 |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 45 |
Genome length (bp) | 158771 |
Character of genome ends | Circularly Permuted |
End Determination Notes | This was the first genome of its type sequenced. No obvious read start buildups or coverage variations could be seen in the sequencing reads. Though it's a negative finding, if true this usually means a circularly permuted genome with headful packaging. |
GC Content | 44.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | University of Central Oklahoma |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | clear center with a cloudy halo. |
Number of Genes | 214 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
167 |
Pitt Freezer Box Grid# |
D10 |
Available Files |
Plaque Picture | Download |