| Detailed Information for Phage Ein37 | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Sophie Harrison and Randolph Kraus |
| Year Found | 2016 |
| Location Found | Olympia, WA USA |
| Finding Institution | The Evergreen State College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 47.06923 N, 122.987102 W Map |
| Discovery Notes | The soil sample was collected from a tomato bed on the campus's organic farm. The dirt was very dry and filled with debris. |
| Naming Notes | Ein is one in German, and this was our first virus discovery. The 37 came from our group number in our class. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 10, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2032 |
| Genome length (bp) | 53748 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 14 bases |
| Overhang Sequence | TAAGCCGCGCGGTA |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | Q |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of North Texas |
| Annotation Status | In GenBank |
| Plaque Notes | Our plaques were consistently uniform and we always had at least one webbed plate. The plaques were clear and centralized. Plaque sizes ranged from 4mm to 1cm. |
| Morphotype | Siphoviridae |
| Number of Genes | 86 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewEin37_1 Ein37_2 Ein37_3 Ein37_4 Ein37_5 Ein37_6 Ein37_7 Ein37_8 Ein37_9 Ein37_10 Ein37_11 Ein37_12 Ein37_13 Ein37_14 Ein37_15 Ein37_16 Ein37_17 Ein37_18 Ein37_19 Ein37_20 Ein37_21 Ein37_22 Ein37_23 Ein37_24 Ein37_25 Ein37_26 Ein37_27 Ein37_28 Ein37_29 Ein37_30 Ein37_31 Ein37_32 Ein37_33 Ein37_34 Ein37_35 Ein37_36 Ein37_37 Ein37_38 Ein37_39 Ein37_40 Ein37_41 Ein37_42 Ein37_43 Ein37_44 Ein37_45 Ein37_46 Ein37_47 Ein37_48 Ein37_49 Ein37_50 Ein37_51 Ein37_52 Ein37_53 Ein37_54 Ein37_55 Ein37_56 Ein37_57 Ein37_58 Ein37_59 Ein37_60 Ein37_61 Ein37_62 Ein37_63 Ein37_64 Ein37_65 Ein37_66 Ein37_67 Ein37_68 Ein37_69 Ein37_70 Ein37_71 Ein37_72 Ein37_73 Ein37_74 Ein37_75 Ein37_76 Ein37_77 Ein37_78 Ein37_79 Ein37_80 Ein37_81 Ein37_82 Ein37_83 Ein37_84 Ein37_85 Ein37_86 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT114159 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
