Mycobacterium phage Hadrien
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Detailed Information for Phage Hadrien
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMaris Pedlow
Year Found2020
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates40.443611 N, 79.958611 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 27, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage310
Genome length (bp)53746
Character of genome ends3' Sticky Overhang
Overhang Length14 bases
Overhang SequenceTAAGCCGCGCGGTA
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterQ
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesThis phage does create lysogens which can be seen in the turbid plaques that have halos.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesThe plaques vary in size from <1-2mm in diameter. They are turbid and the majority also have a cloudy halo.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Hadrien_1

Hadrien_2

Hadrien_3

Hadrien_4

Hadrien_5
(terminase)

Hadrien_6
(portal protein)

Hadrien_7
(capsid maturation protease)

Hadrien_8
(scaffolding protein)

Hadrien_9
(major capsid protein)

Hadrien_10

Hadrien_11
(head-to-tail adaptor)

Hadrien_12
(head-to-tail stopper)

Hadrien_13

Hadrien_14
(tail terminator)

Hadrien_15
(major tail protein)

Hadrien_16

Hadrien_17
(tail assembly chaperone)

Hadrien_18

Hadrien_19

Hadrien_20
(tape measure protein)

Hadrien_21
(minor tail protein)

Hadrien_22
(minor tail protein)

Hadrien_23

Hadrien_24
(minor tail protein)

Hadrien_25
(minor tail protein)

Hadrien_26

Hadrien_27
(minor tail protein)

Hadrien_28

Hadrien_29
(tyrosine integrase)

Hadrien_30
(excise)

Hadrien_31

Hadrien_32
(lysin A)

Hadrien_33
(lysin B)

Hadrien_34
(holin)

Hadrien_35

Hadrien_36

Hadrien_37

Hadrien_38

Hadrien_39

Hadrien_40

Hadrien_41
(DNA binding protein)

Hadrien_42

Hadrien_43

Hadrien_44

Hadrien_45

Hadrien_46

Hadrien_47

Hadrien_48

Hadrien_49

Hadrien_50
(Cro protein)

Hadrien_51

Hadrien_52

Hadrien_53
(helix-turn-helix DNA binding domain protein)

Hadrien_54
(RecE-like exonuclease)

Hadrien_55
(RecT-like ssDNA binding protein)

Hadrien_56

Hadrien_57

Hadrien_58

Hadrien_59

Hadrien_60

Hadrien_61

Hadrien_62

Hadrien_63
(DNA polymerase III subunit)

Hadrien_64

Hadrien_65

Hadrien_66
(DNA methylase)

Hadrien_67

Hadrien_68

Hadrien_69

Hadrien_70

Hadrien_71
(RuvC-like resolvase)

Hadrien_72
(WhiB family transcription factor)

Hadrien_73
(helix-turn-helix DNA binding domain protein)

Hadrien_74

Hadrien_75

Hadrien_76

Hadrien_77

Hadrien_78

Hadrien_79

Hadrien_80
(HNH endonuclease)

Hadrien_81

Hadrien_82

Hadrien_83

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT684594
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.4 x 10^10
Pitt Freezer Box# 129
Pitt Freezer Box Grid# G2
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload