Gordonia phage Gibbles
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Detailed Information for Phage Gibbles
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByRachel Gibbs
Year Found2017
Location FoundLawrence, KS USA
Finding InstitutionUniversity of Kansas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.9558 N, 95.2494 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 8, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage887
Genome length (bp)81488
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length249 bp
GC Content47.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCX
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
Plaque Notesclear, small plaques that varied in size from pinprick to small
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Gibbles_1
(DNA primase)

Gibbles_2
(HNH endonuclease)

Gibbles_3
(HNH endonuclease)

Gibbles_4

Gibbles_5

Gibbles_6

Gibbles_7
(DNA primase)

Gibbles_8
(terminase small subunit)

Gibbles_9
(terminase large subunit)

Gibbles_10
(portal protein)

Gibbles_11

Gibbles_12
(capsid maturation protease)

Gibbles_13
(capsid decoration protein)

Gibbles_14
(major capsid protein)

Gibbles_15

Gibbles_16

Gibbles_17

Gibbles_18

Gibbles_19

Gibbles_20
(major tail protein)

Gibbles_21
(tail assembly chaperone)

Gibbles_22
(tail assembly chaperone)

Gibbles_23
(tape measure protein)

Gibbles_24
(minor tail protein)

Gibbles_25
(minor tail protein)

Gibbles_26
(minor tail protein)

Gibbles_27

Gibbles_28
(lysin A)

Gibbles_29
(membrane protein)

Gibbles_30
(membrane protein)

Gibbles_31
(membrane protein)

Gibbles_32

Gibbles_33

Gibbles_34

Gibbles_35

Gibbles_36

Gibbles_37
(minor tail protein)

Gibbles_38
(lysin B)

Gibbles_39

Gibbles_40
(helicase)

Gibbles_41

Gibbles_42

Gibbles_43

Gibbles_44

Gibbles_45

Gibbles_46

Gibbles_47
(MazG-like nucleotide pyrophosphohydrolase)

Gibbles_48

Gibbles_49

Gibbles_50

Gibbles_51
(exonuclease)

Gibbles_52
(DNA polymerase III sliding clamp)

Gibbles_53

Gibbles_54

Gibbles_55
(helix-turn-helix DNA binding domain protein)

Gibbles_56
(helicase)

Gibbles_57

Gibbles_58
(thymidylate synthase)

Gibbles_59
(HNH endonuclease)

Gibbles_60

Gibbles_61

Gibbles_62

Gibbles_63
(helix-turn-helix DNA binding domain protein)

Gibbles_64

Gibbles_65

Gibbles_66

Gibbles_67

Gibbles_68
(tyrosine integrase)

Gibbles_69

Gibbles_70

Gibbles_71

Gibbles_72

Gibbles_73

Gibbles_74

Gibbles_75

Gibbles_76

Gibbles_77
(helix-turn-helix DNA binding domain protein)

Gibbles_78

Gibbles_79

Gibbles_80

Gibbles_81

Gibbles_82

Gibbles_83
(helicase)

Gibbles_84

Gibbles_85

Gibbles_86

Gibbles_87

Gibbles_88

Gibbles_89

Gibbles_90

Gibbles_91

Gibbles_92

Gibbles_93

Gibbles_94

Gibbles_95

Gibbles_96

Gibbles_99

Gibbles_100

Gibbles_101

Gibbles_102

Gibbles_103

Gibbles_104

Gibbles_105

Gibbles_106

Gibbles_107

Gibbles_108

Gibbles_109

Gibbles_110

Gibbles_111

Gibbles_112

Gibbles_113

Gibbles_114

Gibbles_115

Gibbles_116

Gibbles_117

Gibbles_118

Gibbles_119

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN096363
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 66
Pitt Freezer Box Grid# H1
Available Files
EM PictureDownload
GenBank File for PhameratorDownload