Mycobacterium phage Gravaillia
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Detailed Information for Phage Gravaillia
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByBryan Cortes
Year Found2019
Location FoundHarrisonburg, VA United States
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.4337 N, 78.8612 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 25, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage351
Genome length (bp)53924
Character of genome ends3' Sticky Overhang
Overhang Length14 bases
Overhang SequenceTAAGCCGCGCGGTA
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterQ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionJames Madison University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes79
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Gravaillia_1
(terminase small subunit)

Gravaillia_2

Gravaillia_3

Gravaillia_4

Gravaillia_5
(terminase large subunit)

Gravaillia_6
(portal protein)

Gravaillia_7
(capsid maturation protease)

Gravaillia_8
(scaffolding protein)

Gravaillia_9
(major capsid protein)

Gravaillia_10

Gravaillia_11
(head-to-tail adaptor)

Gravaillia_12
(head-to-tail stopper)

Gravaillia_13

Gravaillia_14
(tail terminator)

Gravaillia_15
(major tail protein)

Gravaillia_16

Gravaillia_17

Gravaillia_18

Gravaillia_19

Gravaillia_20
(tape measure protein)

Gravaillia_21
(minor tail protein)

Gravaillia_22
(minor tail protein)

Gravaillia_23

Gravaillia_24
(minor tail protein)

Gravaillia_25
(minor tail protein)

Gravaillia_26

Gravaillia_27
(minor tail protein)

Gravaillia_28

Gravaillia_29
(tyrosine integrase)

Gravaillia_30
(excise)

Gravaillia_31
(lysin A)

Gravaillia_32
(lysin B)

Gravaillia_33
(holin)

Gravaillia_34

Gravaillia_35

Gravaillia_36

Gravaillia_37

Gravaillia_38

Gravaillia_39

Gravaillia_40

Gravaillia_41
(DNA binding protein)

Gravaillia_42

Gravaillia_43

Gravaillia_44

Gravaillia_45

Gravaillia_46

Gravaillia_47

Gravaillia_48

Gravaillia_49
(Cro protein)

Gravaillia_50

Gravaillia_51

Gravaillia_52
(helix-turn-helix DNA binding domain protein)

Gravaillia_53
(RecE-like exonuclease)

Gravaillia_54
(RecT-like ssDNA binding protein)

Gravaillia_55

Gravaillia_56

Gravaillia_57

Gravaillia_58

Gravaillia_59

Gravaillia_60

Gravaillia_61

Gravaillia_62
(DnaQ-like DNA polymerase III subunit)

Gravaillia_63
(DNA methyltransferase)

Gravaillia_64
(RepA-like replication initiator)

Gravaillia_65

Gravaillia_66

Gravaillia_67

Gravaillia_68
(RuvC-like resolvase)

Gravaillia_69
(WhiB family transcription factor)

Gravaillia_70
(helix-turn-helix DNA binding domain protein)

Gravaillia_71

Gravaillia_72

Gravaillia_73

Gravaillia_74

Gravaillia_75

Gravaillia_76

Gravaillia_77
(HNH endonuclease)

Gravaillia_78

Gravaillia_79

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP820466
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 170
Pitt Freezer Box Grid# C12
Available Files
GenBank File for PhameratorDownload