| Detailed Information for Phage Hum25 | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Humza Raheem |
| Year Found | 2021 |
| Location Found | Oak Brook, IL United States of America |
| Finding Institution | Benedictine University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 22°C |
| GPS Coordinates | 41.824622 N, 87.988113 W Map |
| Discovery Notes | The sample was found from a pond close to 35th street in Oak Brook, Illinois. The skies were cloudy that day and there was no rain for the past couple of days. The soil itself was a little wet and loose. There was some dead leaves, rocks, and twigs. |
| Naming Notes | I used the first 3 letters of my name and the date I was born. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 19, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1287 |
| Genome length (bp) | 42695 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGTGA |
| GC Content | 59.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FQ |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | In GenBank |
| Plaque Notes | The diameter with the fuzziness around it is about 4 mm. The diameter without the fuzziness is about 2 mm. In the first 24 hours after plating, the plaques do not appear that large. Around 48 hours after plating, the plaques get bigger and spread across the plate. |
| Number of Genes | 86 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewHum25_1 Hum25_2 Hum25_3 Hum25_4 Hum25_5 Hum25_6 Hum25_7 Hum25_8 Hum25_9 Hum25_10 Hum25_11 Hum25_12 Hum25_13 Hum25_14 Hum25_15 Hum25_16 Hum25_17 Hum25_18 Hum25_19 Hum25_20 Hum25_21 Hum25_22 Hum25_23 Hum25_24 Hum25_25 Hum25_26 Hum25_27 Hum25_28 Hum25_29 Hum25_30 Hum25_31 Hum25_32 Hum25_33 Hum25_34 Hum25_35 Hum25_36 Hum25_37 Hum25_38 Hum25_39 Hum25_40 Hum25_41 Hum25_42 Hum25_43 Hum25_44 Hum25_45 Hum25_46 Hum25_47 Hum25_48 Hum25_49 Hum25_50 Hum25_51 Hum25_52 Hum25_53 Hum25_54 Hum25_55 Hum25_56 Hum25_57 Hum25_58 Hum25_59 Hum25_60 Hum25_61 Hum25_62 Hum25_63 Hum25_64 Hum25_65 Hum25_66 Hum25_67 Hum25_68 Hum25_69 Hum25_70 Hum25_71 Hum25_72 Hum25_73 Hum25_74 Hum25_75 Hum25_76 Hum25_77 Hum25_78 Hum25_79 Hum25_80 Hum25_81 Hum25_82 Hum25_83 Hum25_84 Hum25_85 Hum25_86 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ244012 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 6.3 x 10^10 |
| Pitt Freezer Box# | 217 |
| Pitt Freezer Box Grid# | D8 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
