Arthrobacter phage Jankie
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| Detailed Information for Phage Jankie | |
| Discovery Information | |
| Isolation Host | Arthrobacter sulfureus ATCC 19098 |
| Found By | Julia Scheithauer |
| Year Found | 2024 |
| Location Found | Silverado, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 33.82 N, 117.64 W Map |
| Discovery Notes | Sample description: dry dirt, underneath a tree covered in dead leaves. Dog was present Depth from which sample was taken: 11 cm Air temperature if sample collected outdoors (in degrees Celsius): 32.2 Additional information of interest or note: Julia’s dog rolled around in the area where the sample was collected before she performed the collection. AL Quarter and Lab section: F24-1B Instructor: Dr. Tejas Bouklas, Dr. Daniel Velez-Ramirez Teaching Assistant: Neel Bonthala Undergraduate Assistant(s): Naye and Aaron Team #1 Name: Let’s Get Lytic Team #1 Members: Julia, Lilly, Daniel, and Michelle |
| Naming Notes | Our process was pretty janky |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4931 |
| Genome length (bp) | 41720 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CCCACCGGCTT |
| GC Content | 68.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FP |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | Description of plaque morphology: turbid, small, fuzzy edges Average size (and size range) diameter in mm: 2 mm |
| Morphotype | Siphoviridae |
| Number of Genes | 67 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJankie_1 Jankie_2 Jankie_3 Jankie_4 Jankie_5 Jankie_6 Jankie_7 Jankie_8 Jankie_9 Jankie_10 Jankie_11 Jankie_12 Jankie_13 Jankie_14 Jankie_15 Jankie_16 Jankie_17 Jankie_18 Jankie_19 Jankie_20 Jankie_21 Jankie_22 Jankie_23 Jankie_24 Jankie_25 Jankie_26 Jankie_27 Jankie_28 Jankie_29 Jankie_30 Jankie_31 Jankie_32 Jankie_33 Jankie_34 Jankie_35 Jankie_36 Jankie_37 Jankie_38 Jankie_39 Jankie_40 Jankie_41 Jankie_42 Jankie_43 Jankie_44 Jankie_45 Jankie_46 Jankie_47 Jankie_48 Jankie_49 Jankie_50 Jankie_51 Jankie_52 Jankie_53 Jankie_54 Jankie_55 Jankie_56 Jankie_57 Jankie_58 Jankie_59 Jankie_60 Jankie_61 Jankie_62 Jankie_63 Jankie_64 Jankie_65 Jankie_66 Jankie_67 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
