Arthrobacter phage Jankie
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| Detailed Information for Phage Jankie | |
| Discovery Information | |
| Isolation Host | Arthrobacter sulfureus ATCC 19098 |
| Found By | Julia Scheithauer |
| Year Found | 2024 |
| Location Found | Silverado, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 33.82 N, 117.64 W Map |
| Discovery Notes | Sample description: dry dirt, underneath a tree covered in dead leaves. Dog was present Depth from which sample was taken: 11 cm Air temperature if sample collected outdoors (in degrees Celsius): 32.2 Additional information of interest or note: Julia’s dog rolled around in the area where the sample was collected before she performed the collection. AL Quarter and Lab section: F24-1B Instructor: Dr. Tejas Bouklas, Dr. Daniel Velez-Ramirez Teaching Assistant: Neel Bonthala Undergraduate Assistant(s): Naye and Aaron Team #1 Name: Let’s Get Lytic Team #1 Members: Julia, Lilly, Daniel, and Michelle |
| Naming Notes | Our process was pretty janky |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4931 |
| Genome length (bp) | 41720 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CCCACCGGCTT |
| GC Content | 68.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FP |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of California, Los Angeles |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | Description of plaque morphology: turbid, small, fuzzy edges Average size (and size range) diameter in mm: 2 mm |
| Morphotype | Siphoviridae |
| Has been Phamerated? | No |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
