Detailed Information for Phage Jazzy4900 | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Shannon Isenhart |
Year Found | 2021 |
Location Found | Lyons, CO USA |
Finding Institution | Colorado State University-Pueblo |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.268333 N, 105.422778 W Map |
Discovery Notes | Rocky soil under a burned but alive pine tree |
Naming Notes | Jazzy is the name of my first dog and the identification number for the volunteer fire department that fought the fire that burned the soil. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 7, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 4144 |
Genome length (bp) | 58504 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCGGCCCT |
GC Content | 48.4% |
Sequencing Notes | In the population that was sequenced of this phage, the sequencing reads showed that approximately 50% of genomes had a 92-base deletion, from position 15922 to 16013 inclusive. The non-deleted (longer) version has been reported as the final consensus sequence of this genome. |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FI |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Colorado State University-Pueblo |
Annotation Status | Overdue (Expected completion by 12/2/2024) |
Number of Genes | 92 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewJazzy4900_1 Jazzy4900_2 Jazzy4900_3 Jazzy4900_4 Jazzy4900_5 Jazzy4900_6 Jazzy4900_7 Jazzy4900_8 Jazzy4900_9 Jazzy4900_10 Jazzy4900_11 Jazzy4900_12 Jazzy4900_13 Jazzy4900_14 Jazzy4900_15 Jazzy4900_16 Jazzy4900_17 Jazzy4900_18 Jazzy4900_19 Jazzy4900_20 Jazzy4900_21 Jazzy4900_22 Jazzy4900_23 Jazzy4900_24 Jazzy4900_25 Jazzy4900_26 Jazzy4900_27 Jazzy4900_28 Jazzy4900_29 Jazzy4900_30 Jazzy4900_31 Jazzy4900_32 Jazzy4900_33 Jazzy4900_34 Jazzy4900_35 Jazzy4900_36 Jazzy4900_37 Jazzy4900_38 Jazzy4900_39 Jazzy4900_40 Jazzy4900_41 Jazzy4900_42 Jazzy4900_43 Jazzy4900_44 Jazzy4900_45 Jazzy4900_46 Jazzy4900_47 Jazzy4900_48 Jazzy4900_49 Jazzy4900_50 Jazzy4900_51 Jazzy4900_52 Jazzy4900_53 Jazzy4900_54 Jazzy4900_55 Jazzy4900_56 Jazzy4900_57 Jazzy4900_58 Jazzy4900_59 Jazzy4900_60 Jazzy4900_61 Jazzy4900_62 Jazzy4900_63 Jazzy4900_64 Jazzy4900_65 Jazzy4900_66 Jazzy4900_67 Jazzy4900_68 Jazzy4900_69 Jazzy4900_70 Jazzy4900_71 Jazzy4900_72 Jazzy4900_73 Jazzy4900_74 Jazzy4900_75 Jazzy4900_76 Jazzy4900_77 Jazzy4900_78 Jazzy4900_79 Jazzy4900_80 Jazzy4900_81 Jazzy4900_82 Jazzy4900_83 Jazzy4900_84 Jazzy4900_85 Jazzy4900_86 Jazzy4900_87 Jazzy4900_88 Jazzy4900_89 Jazzy4900_90 Jazzy4900_91 Jazzy4900_92 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |