Arthrobacter phage Jesse
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Detailed Information for Phage Jesse | |
Discovery Information | |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Shawn London |
Year Found | 2014 |
Location Found | Broomal, PA USA |
Finding Institution | Saint Joseph's University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | Unavailable |
Discovery Notes | Taken from just in front of a tomato plant in the family garden. |
Sequencing Information | |
Sequencing Complete? | No |
Sequencing Facility | The Center for Genomics and Bioinformatics, Indiana University |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 229 |
Genome length (bp) | Unknown |
Character of genome ends | Unknown |
Sequencing Notes | This phage is Amigo-like, and thus has the same pattern of ends. There's a terminal redundancy where one end is clearly defined (the right end as the genome is canonically oriented) and the other end is less clear. The left end was chosen to match Amigo's left end, and also matches the approximate boundary of the region of double coverage in the Jesse sequencing data. With the chosen end, the terminal repeat is 1589 bp, though this is approximate. |
Fasta file available? | No |
Characterization | |
Cluster | Unclustered |
Subcluster | -- |
Annotating Institution | Unknown or unassigned |
Annotation Status | Not sequenced |
Plaque Notes | Various plaque sizes ranging from 0.5 - 3 cm in diameter. Clear plaques as well. |
Morphotype | Siphoviridae |
Has been Phamerated? | No |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 148 |
Pitt Freezer Box Grid# | B7 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |