
Detailed Information for Phage Jinkies | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Ben Brazelton, Max Grill |
Year Found | 2019 |
Location Found | Arab, AL United States |
Finding Institution | University of Alabama at Birmingham |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 27°C |
GPS Coordinates | 34.3215 N, 86.512 W Map |
Discovery Notes | The phage was discovered on September 1 2019 at 89°F and 8cm depth. The soil was located in a flowerbed stretching across my pawpaw's backyard. |
Naming Notes | In honor of the pink teams which come before us and left us with the following warning above our bench: "Beware the ghost phage -Jinkies!" Only through hard work and dedication were we able to break the curse which has plagued this group name for years and years. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 14, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 1595 |
Genome length (bp) | 49118 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FL |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | University of Alabama at Birmingham |
Annotation Status | In GenBank |
Morphotype | Myoviridae |
Number of Genes | 84 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewJinkies_1 Jinkies_2 Jinkies_3 Jinkies_4 Jinkies_5 Jinkies_6 Jinkies_7 Jinkies_8 Jinkies_9 Jinkies_10 Jinkies_11 Jinkies_12 Jinkies_13 Jinkies_14 Jinkies_15 Jinkies_16 Jinkies_17 Jinkies_18 Jinkies_19 Jinkies_20 Jinkies_21 Jinkies_22 Jinkies_23 Jinkies_24 Jinkies_25 Jinkies_26 Jinkies_27 Jinkies_28 Jinkies_29 Jinkies_30 Jinkies_31 Jinkies_32 Jinkies_33 Jinkies_34 Jinkies_35 Jinkies_36 Jinkies_37 Jinkies_38 Jinkies_39 Jinkies_40 Jinkies_41 Jinkies_42 Jinkies_43 Jinkies_44 Jinkies_45 Jinkies_46 Jinkies_47 Jinkies_48 Jinkies_49 Jinkies_50 Jinkies_51 Jinkies_52 Jinkies_53 Jinkies_54 Jinkies_55 Jinkies_56 Jinkies_57 Jinkies_58 Jinkies_59 Jinkies_60 Jinkies_61 Jinkies_62 Jinkies_63 Jinkies_64 Jinkies_65 Jinkies_66 Jinkies_67 Jinkies_68 Jinkies_69 Jinkies_70 Jinkies_71 Jinkies_72 Jinkies_73 Jinkies_74 Jinkies_75 Jinkies_76 Jinkies_77 Jinkies_78 Jinkies_79 Jinkies_80 Jinkies_81 Jinkies_82 Jinkies_83 Jinkies_84 |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MT498043 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
SEA Lysate Titer | 1.24x10^11 |
Pitt Freezer Box# | 103 |
Pitt Freezer Box Grid# | E10 |
Available Files | |
EM Picture | Download |
GenBank File for Phamerator | Download |