Arthrobacter phage Jinkies
Jinkies Plaque Picture
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Detailed Information for Phage Jinkies
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByBen Brazelton, Max Grill
Year Found2019
Location FoundArab, AL United States
Finding InstitutionUniversity of Alabama at Birmingham
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature27°C
GPS Coordinates34.3215 N, 86.512 W Map
Discovery NotesThe phage was discovered on September 1 2019 at 89°F and 8cm depth. The soil was located in a flowerbed stretching across my pawpaw's backyard.
Naming NotesIn honor of the pink teams which come before us and left us with the following warning above our bench: "Beware the ghost phage -Jinkies!" Only through hard work and dedication were we able to break the curse which has plagued this group name for years and years.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1595
Genome length (bp)49118
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFL
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes84
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Jinkies_1
(helix-turn-helix DNA binding domain protein)

Jinkies_2
(terminase large subunit)

Jinkies_3
(DNA methylase)

Jinkies_4
(portal protein)

Jinkies_5

Jinkies_6
(capsid maturation protease)

Jinkies_7
(HNH endonuclease)

Jinkies_8
(scaffolding protein)

Jinkies_9

Jinkies_10
(major capsid protein)

Jinkies_11

Jinkies_12

Jinkies_13

Jinkies_14

Jinkies_15
(methyltransferase)

Jinkies_16

Jinkies_17
(tail sheath protein)

Jinkies_18
(tail tube protein)

Jinkies_19
(methyltransferase)

Jinkies_20

Jinkies_21
(tape measure protein)

Jinkies_22
(LysM-like endolysin)

Jinkies_23
(HNH endonuclease)

Jinkies_24
(minor tail protein)

Jinkies_25

Jinkies_26

Jinkies_27

Jinkies_28

Jinkies_29

Jinkies_30
(lysin A)

Jinkies_31

Jinkies_32
(baseplate wedge protein)

Jinkies_33
(baseplate J protein)

Jinkies_34

Jinkies_35

Jinkies_36

Jinkies_37

Jinkies_38

Jinkies_39
(exonuclease)

Jinkies_40

Jinkies_41
(RecT-like ssDNA binding protein)

Jinkies_42
(helix-turn-helix DNA binding domain protein)

Jinkies_43

Jinkies_44
(ssDNA-binding protein)

Jinkies_45
(NrdH-like glutaredoxin)

Jinkies_46

Jinkies_47

Jinkies_48

Jinkies_49

Jinkies_50

Jinkies_51

Jinkies_52

Jinkies_53

Jinkies_54

Jinkies_55

Jinkies_56

Jinkies_57

Jinkies_58

Jinkies_59

Jinkies_60

Jinkies_61

Jinkies_62

Jinkies_63

Jinkies_64

Jinkies_65

Jinkies_66

Jinkies_67

Jinkies_68

Jinkies_69

Jinkies_70

Jinkies_71

Jinkies_72

Jinkies_73

Jinkies_74

Jinkies_75

Jinkies_76

Jinkies_77

Jinkies_78

Jinkies_79

Jinkies_80

Jinkies_81

Jinkies_82

Jinkies_83

Jinkies_84
(helix-turn-helix DNA binding domain protein)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT498043
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.24x10^11
Pitt Freezer Box# 103
Pitt Freezer Box Grid# E10
Available Files
EM PictureDownload
GenBank File for PhameratorDownload