Arthrobacter phage Kharcho
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Detailed Information for Phage Kharcho
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found ByErika Znamenski
Year Found2020
Location FoundGatineau, Canada
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature20°C
GPS Coordinates45.461461 N, 75.746062 W Map
Naming NotesI thought it looked a little like soup so I just named it after a soup I have pretty often.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 13, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage387
Genome length (bp)63572
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length952 bp
GC Content65.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFM
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Ottawa
Annotation StatusIn GenBank
Plaque NotesFormed clear plaques.
MorphotypeSiphoviridae
Number of Genes105
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Kharcho_1
(head-to-tail stopper)

Kharcho_2

Kharcho_3
(minor capsid protein)

Kharcho_4

Kharcho_5

Kharcho_6
(nuclease)

Kharcho_7

Kharcho_8

Kharcho_9

Kharcho_10

Kharcho_11

Kharcho_12

Kharcho_13

Kharcho_14

Kharcho_15

Kharcho_16

Kharcho_17

Kharcho_18
(deoxyuridine triphosphatase)

Kharcho_19

Kharcho_20

Kharcho_21

Kharcho_22

Kharcho_23

Kharcho_24
(ribonucleotide reductase)

Kharcho_25

Kharcho_26

Kharcho_27

Kharcho_28

Kharcho_29

Kharcho_30

Kharcho_31

Kharcho_32

Kharcho_33

Kharcho_34

Kharcho_35
(HicA-like toxin)

Kharcho_36

Kharcho_37

Kharcho_38

Kharcho_39
(major tail protein)

Kharcho_40
(major tail protein)

Kharcho_41
(tail assembly chaperone)

Kharcho_42
(tail assembly chaperone)

Kharcho_43
(tape measure protein)

Kharcho_44
(minor tail protein)

Kharcho_45
(minor tail protein)

Kharcho_46
(minor tail protein)

Kharcho_47
(minor tail protein)

Kharcho_48

Kharcho_49

Kharcho_50
(endolysin)

Kharcho_51
(holin)

Kharcho_52

Kharcho_53
(host nuclease inhibitor)

Kharcho_54
(AAA-ATPase)

Kharcho_55
(helix-turn-helix DNA binding domain protein)

Kharcho_56

Kharcho_57

Kharcho_58
(HNH endonuclease)

Kharcho_59
(helix-turn-helix DNA binding domain protein)

Kharcho_60
(WhiB family transcription factor)

Kharcho_61
(DNA helicase)

Kharcho_62

Kharcho_63

Kharcho_64

Kharcho_65
(carboxylate amine ligase)

Kharcho_66
(glutamine amidotransferase domain protein)

Kharcho_67

Kharcho_68

Kharcho_69
(ParB-like nuclease domain protein)

Kharcho_70

Kharcho_71

Kharcho_72
(ParB-like nuclease domain protein)

Kharcho_73
(ParB-like nuclease domain protein)

Kharcho_74
(oxidoreductase)

Kharcho_75
(adenylate kinase)

Kharcho_76
(terminase small subunit)

Kharcho_77
(terminase large subunit)

Kharcho_78

Kharcho_79

Kharcho_80

Kharcho_81
(SSB protein)

Kharcho_82

Kharcho_83

Kharcho_84
(portal protein)

Kharcho_85

Kharcho_86

Kharcho_87
(RNA ligase)

Kharcho_88
(VRR-Nuc domain protein)

Kharcho_89

Kharcho_90

Kharcho_91

Kharcho_92

Kharcho_93

Kharcho_94

Kharcho_95

Kharcho_96

Kharcho_97

Kharcho_98

Kharcho_99
(head fiber protein)

Kharcho_100
(major capsid protein)

Kharcho_101

Kharcho_102

Kharcho_103

Kharcho_104
(head-to-tail stopper)

Kharcho_105

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ938578
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 128
Pitt Freezer Box Grid# E7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload