Arthrobacter phage Ottawa
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Detailed Information for Phage Ottawa
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found ByNicolas Toex
Year Found2021
Location FoundOttawa, Canada
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature28°C
GPS Coordinates45.423333 N, 75.704167 W Map
Discovery NotesThis sample is located near a cyclist path behind the parliament and supreme court of Canada, and next to Ottawa river. The soil was composed of dirt and sand, and was slightly moist (3-5 cm below the surface). This phage has been found at the same time as Winseler.
Naming NotesThis phage has been taken in just behind the parliament and supreme court of Canada, which are located in Canada's capital, Ottawa, ON.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 12, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage778
Genome length (bp)63522
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length952 bp
GC Content65.2%
Sequencing NotesThis phage has one clearly defined end, but the other end of the terminal repeat isn't as precisely defined.
Fasta file available?Yes: Download fasta file
Characterization
ClusterFM
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Ottawa
Annotation StatusIn GenBank
Plaque NotesPlaques size are between medium and small.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Ottawa_1
(head-to-tail stopper)

Ottawa_2

Ottawa_3
(minor capsid protein)

Ottawa_4

Ottawa_5

Ottawa_6
(nuclease)

Ottawa_7

Ottawa_8

Ottawa_9

Ottawa_10

Ottawa_11

Ottawa_12

Ottawa_13

Ottawa_14

Ottawa_15

Ottawa_16

Ottawa_17

Ottawa_18
(deoxyuridine triphosphatase)

Ottawa_19

Ottawa_20

Ottawa_21

Ottawa_22

Ottawa_23

Ottawa_24
(ribonucleotide reductase)

Ottawa_25

Ottawa_26

Ottawa_27

Ottawa_28

Ottawa_29

Ottawa_30

Ottawa_31

Ottawa_32

Ottawa_33

Ottawa_34

Ottawa_35
(HicA-like toxin)

Ottawa_36

Ottawa_37

Ottawa_38

Ottawa_39
(major tail protein)

Ottawa_40
(major tail protein)

Ottawa_41
(tail assembly chaperone)

Ottawa_42
(tail assembly chaperone)

Ottawa_43
(tape measure protein)

Ottawa_44
(minor tail protein)

Ottawa_45
(minor tail protein)

Ottawa_46

Ottawa_47

Ottawa_48

Ottawa_49

Ottawa_50
(endolysin)

Ottawa_51
(holin)

Ottawa_52

Ottawa_53
(host nuclease inhibitor)

Ottawa_54
(AAA-ATPase)

Ottawa_55
(helix-turn-helix DNA binding domain protein)

Ottawa_56

Ottawa_57

Ottawa_58
(HNH endonuclease)

Ottawa_59
(helix-turn-helix DNA binding domain protein)

Ottawa_60
(WhiB family transcription factor)

Ottawa_61
(DNA helicase)

Ottawa_62

Ottawa_63

Ottawa_64

Ottawa_65
(carboxylate amine ligase)

Ottawa_66
(glutamine amidotransferase domain protein)

Ottawa_67

Ottawa_68

Ottawa_69
(ParB-like nuclease domain protein)

Ottawa_70

Ottawa_71

Ottawa_72
(ParB-like nuclease domain protein)

Ottawa_73
(ParB-like nuclease domain protein)

Ottawa_74
(oxidoreductase)

Ottawa_75
(adenylate kinase)

Ottawa_76
(terminase small subunit)

Ottawa_77
(terminase large subunit)

Ottawa_78

Ottawa_79

Ottawa_80

Ottawa_81
(SSB protein)

Ottawa_82

Ottawa_83

Ottawa_84
(portal protein)

Ottawa_85

Ottawa_86

Ottawa_87
(RNA ligase)

Ottawa_88
(VRR-Nuc domain protein)

Ottawa_89

Ottawa_90

Ottawa_91

Ottawa_92

Ottawa_93

Ottawa_94

Ottawa_95

Ottawa_96

Ottawa_97

Ottawa_98

Ottawa_99
(head fiber protein)

Ottawa_100
(major capsid protein)

Ottawa_101

Ottawa_102

Ottawa_103

Ottawa_104
(head-to-tail stopper)

Ottawa_105

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOQ938580
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 133
Pitt Freezer Box Grid# E6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload