Corynebacterium phage Kimchi1738
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Detailed Information for Phage Kimchi1738
Discovery Information
Isolation HostCorynebacterium vitaeruminis NCIB 9291
Found BySameen Ali, Sam Castillo
Year Found2016
Location FoundBirmingham, AL USA
Finding InstitutionUniversity of Alabama at Birmingham
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates33.54368 N, 86.779633 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 12, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage950
Genome length (bp)66915
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCTTCGGTGC
GC Content52.3%
Sequencing NotesReads for an Oxford Nanopore MinION were used to resolve a tricky AT-rich repeat region in this genome.
Fasta file available?Yes: Download fasta file
Characterization
ClusterEN
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
Number of Genes94
Number of tRNAs5
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Kimchi1738_1
(terminase small subunit)

Kimchi1738_2

Kimchi1738_3

Kimchi1738_4

Kimchi1738_5

Kimchi1738_6

Kimchi1738_7

Kimchi1738_8

Kimchi1738_9
(ThyX-like thymidylate synthase)

Kimchi1738_10
(nucleotide pyrophosphohydrolase)

Kimchi1738_11
(HNH endonuclease)

Kimchi1738_12
(terminase large subunit)

Kimchi1738_13
(portal protein)

Kimchi1738_14
(capsid maturation protease)

Kimchi1738_15

Kimchi1738_16

Kimchi1738_17
(major capsid protein)

Kimchi1738_18

Kimchi1738_19

Kimchi1738_20

Kimchi1738_21

Kimchi1738_22

Kimchi1738_23

Kimchi1738_24

Kimchi1738_25

Kimchi1738_26

Kimchi1738_27
(tail assembly chaperone)

Kimchi1738_28
(tail assembly chaperone)

Kimchi1738_29
(tape measure protein)

Kimchi1738_30

Kimchi1738_31
(minor tail protein)

Kimchi1738_32
(minor tail protein)

Kimchi1738_33

Kimchi1738_34

Kimchi1738_35

Kimchi1738_36
(lysin A)

Kimchi1738_37
(holin)

Kimchi1738_38
(DNA primase/polymerase)

Kimchi1738_39
(WhiB family transcription factor)

Kimchi1738_40

Kimchi1738_41

Kimchi1738_42

Kimchi1738_43
(DnaE-like DNA polymerase III alpha)

Kimchi1738_44

Kimchi1738_45 — tRNA

Kimchi1738_46

Kimchi1738_47 — tRNA

Kimchi1738_48 — tRNA

Kimchi1738_49 — tRNA

Kimchi1738_50 — tRNA

Kimchi1738_51
(thioredoxin)

Kimchi1738_52

Kimchi1738_53
(AAA-ATPase)

Kimchi1738_54

Kimchi1738_55

Kimchi1738_56

Kimchi1738_57

Kimchi1738_58

Kimchi1738_59

Kimchi1738_60

Kimchi1738_61

Kimchi1738_62

Kimchi1738_63

Kimchi1738_64

Kimchi1738_65

Kimchi1738_66

Kimchi1738_67

Kimchi1738_68

Kimchi1738_69

Kimchi1738_70

Kimchi1738_71

Kimchi1738_72

Kimchi1738_73
(DNA helicase)

Kimchi1738_74
(ribonucleotide reductase)

Kimchi1738_75

Kimchi1738_76
(ribonucleotide reductase)

Kimchi1738_77

Kimchi1738_78

Kimchi1738_79

Kimchi1738_80

Kimchi1738_81

Kimchi1738_82

Kimchi1738_83

Kimchi1738_84

Kimchi1738_85

Kimchi1738_86

Kimchi1738_87

Kimchi1738_88

Kimchi1738_89

Kimchi1738_90

Kimchi1738_91

Kimchi1738_92

Kimchi1738_93

Kimchi1738_94

Kimchi1738_95

Kimchi1738_96

Kimchi1738_97

Kimchi1738_98

Kimchi1738_99

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH926057
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5.8*10^10
Pitt Freezer Box# 32
Pitt Freezer Box Grid# C11
Available Files
GenBank File for PhameratorDownload