Detailed Information for Phage Kimchi1738 |
Discovery Information |
Isolation Host | Corynebacterium vitaeruminis NCIB 9291 |
Found By | Sameen Ali, Sam Castillo |
Year Found | 2016 |
Location Found | Birmingham, AL USA |
Finding Institution | University of Alabama at Birmingham |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 33.54368 N, 86.779633 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 12, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 950 |
Genome length (bp) | 66915 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCTTCGGTGC |
GC Content | 52.3% |
Sequencing Notes | Reads for an Oxford Nanopore MinION were used to resolve a tricky AT-rich repeat region in this genome. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EN |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Alabama at Birmingham |
Annotation Status | In GenBank |
Number of Genes | 94 |
Number of tRNAs | 5 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH926057 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
5.8*10^10 |
Pitt Freezer Box# |
32 |
Pitt Freezer Box Grid# |
C11 |
Available Files |
GenBank File for Phamerator | Download |