| Detailed Information for Phage Kitkat |
| Discovery Information |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Katherine DeRuff |
| Year Found | 2013 |
| Location Found | Ross, CA USA |
| Finding Institution | Bucknell University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 37.9625 N, 122.5550 W Map |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 878 |
| Sanger Finishing Reactions | 5 |
| Genome length (bp) | 58560 |
| Character of genome ends | Unknown |
| GC Content | 63.4% |
| Sequencing Notes | This phage has a bizarre coverage pattern. Over 95% of the reads align to one strand (the reverse strand as the final sequence is reported) and only a smattering of reads align to the other. This is highly unusual, and as of Jan 2016 has only been seen in the other Cluster AT phage, Ezio.
Care was taken to ensure that this was not a bioinformatic artifact, and this genome was actually sequenced by Illumina in two different sequencing centers, each time yielding the same coverage pattern. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 100 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU647627 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
148 |
| Pitt Freezer Box Grid# |
A5 |
| Available Files |
| EM Picture | Download |
| Final DNAMaster File | Download |