| Detailed Information for Phage Kitkat | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Katherine DeRuff |
| Year Found | 2013 |
| Location Found | Ross, CA USA |
| Finding Institution | Bucknell University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 37.9625 N, 122.5550 W Map |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 878 |
| Sanger Finishing Reactions | 5 |
| Genome length (bp) | 58560 |
| Character of genome ends | Unknown |
| GC Content | 63.4% |
| Sequencing Notes | This phage has a bizarre coverage pattern. Over 95% of the reads align to one strand (the reverse strand as the final sequence is reported) and only a smattering of reads align to the other. This is highly unusual, and as of Jan 2016 has only been seen in the other Cluster AT phage, Ezio. Care was taken to ensure that this was not a bioinformatic artifact, and this genome was actually sequenced by Illumina in two different sequencing centers, each time yielding the same coverage pattern. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AT |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 100 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewKitkat_1 Kitkat_2 Kitkat_3 Kitkat_4 Kitkat_5 Kitkat_6 Kitkat_7 Kitkat_8 Kitkat_9 Kitkat_10 Kitkat_11 Kitkat_12 Kitkat_13 Kitkat_14 Kitkat_15 Kitkat_16 Kitkat_17 Kitkat_18 Kitkat_19 Kitkat_20 Kitkat_21 Kitkat_22 Kitkat_23 Kitkat_24 Kitkat_25 Kitkat_26 Kitkat_27 Kitkat_28 Kitkat_29 Kitkat_30 Kitkat_31 Kitkat_32 Kitkat_33 Kitkat_34 Kitkat_35 Kitkat_36 Kitkat_37 Kitkat_38 Kitkat_39 Kitkat_40 Kitkat_41 Kitkat_42 Kitkat_43 Kitkat_44 Kitkat_45 Kitkat_46 Kitkat_47 Kitkat_48 Kitkat_49 Kitkat_50 Kitkat_51 Kitkat_52 Kitkat_53 Kitkat_54 Kitkat_55 Kitkat_56 Kitkat_57 Kitkat_58 Kitkat_59 Kitkat_60 Kitkat_61 Kitkat_62 Kitkat_63 Kitkat_64 Kitkat_65 Kitkat_66 Kitkat_67 Kitkat_68 Kitkat_69 Kitkat_70 Kitkat_71 Kitkat_72 Kitkat_73 Kitkat_74 Kitkat_75 Kitkat_76 Kitkat_77 Kitkat_78 Kitkat_79 Kitkat_80 Kitkat_81 Kitkat_82 Kitkat_83 Kitkat_84 Kitkat_85 Kitkat_86 Kitkat_87 Kitkat_88 Kitkat_89 Kitkat_90 Kitkat_91 Kitkat_92 Kitkat_93 Kitkat_94 Kitkat_95 Kitkat_96 Kitkat_97 Kitkat_98 Kitkat_99 Kitkat_100 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU647627 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 148 |
| Pitt Freezer Box Grid# | A5 |
| Available Files | |
| EM Picture | Download |
| Final DNAMaster File | Download |