Detailed Information for Phage OneUp |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Matthew Montgomery |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.447537 N, 79.952404 W Map |
Naming Notes | OneUp is the name of a shop that my friend owns. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 5, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 503 |
Genome length (bp) | 93577 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCGACGCTC |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CQ |
Subcluster | CQ2 |
Cluster Life Cycle | Temperate |
Lysogeny Notes | OneUp does not form at lysogen. |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | OneUp forms very large, clear plaques. |
Morphotype | Siphoviridae |
Number of Genes | 163 |
Number of tRNAs | 9 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU998245 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
6 |
Pitt Freezer Box Grid# |
E6 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |