Detailed Information for Phage PSonyx |
Discovery Information |
Isolation Host | Corynebacterium glutamicum MB001 |
Found By | Anastassiya Litvinov |
Year Found | 2022 |
Location Found | Massy, France |
Finding Institution | University Paris-Saclay |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 48.72538 N, 2.27359 E Map |
Discovery Notes | Phage was found from a pond where "bacterial blooms" were observed following a long drought. |
Naming Notes | The phage is called after the initials of our university (Paris-Saclay) and the name Onyx. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 791 |
Genome length (bp) | 80277 |
Character of genome ends | Circularly Permuted |
GC Content | 53.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | University Paris-Saclay |
Annotation Status | In GenBank |
Plaque Notes | Clear with irregular edges, 1.5 mm large |
Morphotype | Siphoviridae |
Number of Genes | 136 |
Number of tRNAs | 5 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR521085 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |