| Detailed Information for Phage PSonyx |
| Discovery Information |
| Isolation Host | Corynebacterium glutamicum MB001 |
| Found By | Anastassiya Litvinov |
| Year Found | 2022 |
| Location Found | Massy, France |
| Finding Institution | University Paris-Saclay |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 48.72538 N, 2.27359 E Map |
| Discovery Notes | Phage was found from a pond where "bacterial blooms" were observed following a long drought. |
| Naming Notes | The phage is called after the initials of our university (Paris-Saclay) and the name Onyx. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 791 |
| Genome length (bp) | 80277 |
| Character of genome ends | Circularly Permuted |
| GC Content | 53.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | Singleton |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | University Paris-Saclay |
| Annotation Status | In GenBank |
| Plaque Notes | Clear with irregular edges, 1.5 mm large |
| Morphotype | Siphoviridae |
| Number of Genes | 136 |
| Number of tRNAs | 5 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR521085 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
