Microbacterium phage PineapplePizza
PineapplePizza Plaque Picture
PineapplePizza EM Picture
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Detailed Information for Phage PineapplePizza
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJuan Brito
Year Found2020
Location FoundAmherst, MA United States
Finding InstitutionUniversity of Massachusetts Amherst
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature-3°C
GPS Coordinates42.3747 N, 72.5196 W Map
Discovery NotesIn front of Bank of America near a bus stop, collected from surface
Naming NotesMy favorite pizza topping
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 8, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage9214
Genome length (bp)16662
Character of genome endsCovalent Terminal Protein
End Determination NotesThough not yet experimentally verified, we believe that it's likely that this phage's genome ends are covalently bound to a Terminal Protein when in the capsid. The evidence for this is the similarity to other phages that have similar ends. Also, no sequencing reads continued past the genome ends, which is unusual in the case of a genome with 3' or 5' genome extensions, and there is a 101-bp inverted repeat at the ends of the genome.
GC Content53.6%
Fasta file available?Yes: Download fasta file
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Massachusetts Amherst
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON724010
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# B4
Available Files
GenBank File for PhameratorDownload