Microbacterium phage Pochacco
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| Detailed Information for Phage Pochacco | |
| Discovery Information | |
| Isolation Host | Microbacterium paraoxydans NRRL B-24275 |
| Former names | Pheliz |
| Found By | Felicity Hernandez |
| Year Found | 2024 |
| Location Found | Riverside, CA USA |
| Finding Institution | La Sierra University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 21°C |
| GPS Coordinates | 33.90076 N, 117.49401 W Map |
| Discovery Notes | The sample was collected from soil next to lots of bushes and vegetation. The soil was dark brown but not very moist. Sample was collected from just under the surface of the soil to about an inch deep, and there were many roots and other matter that was collected with it. |
| Naming Notes | Feliz was a nickname given to me. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 10921 |
| Genome length (bp) | 17880 |
| Character of genome ends | Covalent Terminal Protein |
| GC Content | 52.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | GK |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | La Sierra University |
| Annotation Status | QC Complete |
| Number of Genes | 25 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPochacco_1 Pochacco_2 Pochacco_3 Pochacco_4 Pochacco_5 Pochacco_6 Pochacco_7 Pochacco_8 Pochacco_9 Pochacco_10 Pochacco_11 Pochacco_12 Pochacco_13 Pochacco_14 Pochacco_15 Pochacco_16 Pochacco_17 Pochacco_18 Pochacco_19 Pochacco_20 Pochacco_21 Pochacco_22 Pochacco_23 Pochacco_24 Pochacco_25 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 200 |
| Pitt Freezer Box Grid# | B12 |
| Available Files | |
| GenBank File for Phamerator | Download |