| Detailed Information for Phage ProfFrink | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Megan Dennis |
| Year Found | 2021 |
| Location Found | Poughkeepsie, NY USA |
| Finding Institution | Marist College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 41.694711 N, 73.91285 W Map |
| Discovery Notes | Damp soil from surface to approximately 1 inch below surface, soil is dense/full of clay, a few spruce needles were present in the direct isolation. Collected in early August one day after rain, air temperature approx 80F. |
| Naming Notes | Named after Springfield's best mad scientist & nerdy professor. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 11, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1036 |
| Genome length (bp) | 54478 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGACCT |
| GC Content | 51.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AW |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Marist College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are clear, approximately 1mm in diameter |
| Morphotype | Siphoviridae |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
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| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ244014 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.7 x10^10 pfu/ml |
| Pitt Freezer Box# | 134 |
| Pitt Freezer Box Grid# | H7 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |