Gordonia phage Rahul
Add or modify phage thumbnail images to appear at the top of this page.
Know something about this phage that we don't? Modify its data.
| Detailed Information for Phage Rahul | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Former names | VinShetti |
| Found By | Rahul Shettigar |
| Year Found | 2021 |
| Location Found | Santa Cruz, CA United States of America |
| Finding Institution | University of California, Santa Cruz |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.414 N, 119.8489 W Map |
| Naming Notes | Name is derived from the discoverer's mother, as the phage was first isolated on her birthday. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 25, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2973 |
| Genome length (bp) | 16228 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 6 bases |
| Overhang Sequence | ACCCTC |
| GC Content | 68.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CW |
| Subcluster | CW2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of California, Santa Cruz |
| Annotation Status | In GenBank |
| Number of Genes | 26 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRahul_1 Rahul_2 Rahul_3 Rahul_4 Rahul_5 Rahul_6 Rahul_7 Rahul_8 Rahul_9 Rahul_10 Rahul_11 Rahul_12 Rahul_13 Rahul_14 Rahul_15 Rahul_16 Rahul_17 Rahul_18 Rahul_19 Rahul_20 Rahul_21 Rahul_22 Rahul_23 Rahul_24 Rahul_25 Rahul_26 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR521067 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
