Gordonia phage RedWattleHog
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Detailed Information for Phage RedWattleHog
Discovery Information
Isolation HostGordonia terrae 3612
Found ByKate Welsh, Dylan Madden
Year Found2019
Location FoundOrono, ME United States
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates44.58958 N, 69.29344 W Map
Naming NotesOriginal soil sample was taken from a pig pen in unity Maine. A red wattle hog is a kind of pig.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 22, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage560
Genome length (bp)135372
Character of genome endsCircularly Permuted
GC Content64.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDX
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes212
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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RedWattleHog_1
(terminase large subunit)

RedWattleHog_2
(HNH endonuclease)

RedWattleHog_3
(ribbon-helix-helix DNA binding domain protein)

RedWattleHog_4

RedWattleHog_5

RedWattleHog_6

RedWattleHog_7

RedWattleHog_8

RedWattleHog_9

RedWattleHog_10

RedWattleHog_11
(portal protein)

RedWattleHog_12

RedWattleHog_13

RedWattleHog_14

RedWattleHog_15
(major capsid protein)

RedWattleHog_16
(holliday junction resolvase)

RedWattleHog_17
(ribonucleotide reductase)

RedWattleHog_18
(HNH endonuclease)

RedWattleHog_19
(RNA ligase)

RedWattleHog_20

RedWattleHog_21

RedWattleHog_22
(HNH endonuclease)

RedWattleHog_23

RedWattleHog_24

RedWattleHog_25

RedWattleHog_26

RedWattleHog_27
(HNH endonuclease)

RedWattleHog_28

RedWattleHog_29
(minor tail protein)

RedWattleHog_30
(minor tail protein)

RedWattleHog_31

RedWattleHog_32

RedWattleHog_33
(minor tail protein)

RedWattleHog_34

RedWattleHog_35

RedWattleHog_36

RedWattleHog_37

RedWattleHog_38
(tail sheath protein)

RedWattleHog_39

RedWattleHog_40

RedWattleHog_41

RedWattleHog_42

RedWattleHog_43

RedWattleHog_44
(tail assembly chaperone)

RedWattleHog_45
(tail assembly chaperone)

RedWattleHog_46
(tape measure protein)

RedWattleHog_47
(minor tail protein)

RedWattleHog_48

RedWattleHog_49

RedWattleHog_50
(minor tail protein)

RedWattleHog_51
(minor tail protein)

RedWattleHog_52

RedWattleHog_53
(baseplate wedge protein)

RedWattleHog_54
(baseplate J protein)

RedWattleHog_55
(minor tail protein)

RedWattleHog_56
(minor tail protein)

RedWattleHog_57

RedWattleHog_58

RedWattleHog_59

RedWattleHog_60

RedWattleHog_61

RedWattleHog_62
(DNA helicase)

RedWattleHog_63

RedWattleHog_64

RedWattleHog_65

RedWattleHog_66

RedWattleHog_67

RedWattleHog_68
(helix-turn-helix DNA binding domain protein)

RedWattleHog_69
(exonuclease)

RedWattleHog_70
(aminotransferase)

RedWattleHog_71
(RNA binding protein)

RedWattleHog_72

RedWattleHog_73
(DnaC-like helicase loader)

RedWattleHog_74
(DnaB-like dsDNA helicase)

RedWattleHog_75
(DNA primase)

RedWattleHog_76

RedWattleHog_77
(DnaJ-like chaperonin)

RedWattleHog_78
(ssDNA-binding protein)

RedWattleHog_79
(DnaE-like DNA polymerase III)

RedWattleHog_80
(RecA-like DNA recombinase)

RedWattleHog_81
(holliday junction resolvase)

RedWattleHog_82

RedWattleHog_83
(Cas4 family exonuclease)

RedWattleHog_84

RedWattleHog_85
(HNH endonuclease)

RedWattleHog_86
(helix-turn-helix DNA binding domain protein)

RedWattleHog_87

RedWattleHog_88

RedWattleHog_89 — tRNA
(tRNA-Arg(cct))

RedWattleHog_90

RedWattleHog_91
(helix-turn-helix DNA binding domain protein)

RedWattleHog_92

RedWattleHog_93

RedWattleHog_94

RedWattleHog_95

RedWattleHog_96

RedWattleHog_97

RedWattleHog_98

RedWattleHog_99

RedWattleHog_100
(HNH endonuclease)

RedWattleHog_101

RedWattleHog_102

RedWattleHog_103
(ribbon-helix-helix DNA binding domain protein)

RedWattleHog_104

RedWattleHog_105

RedWattleHog_106

RedWattleHog_107

RedWattleHog_108

RedWattleHog_109

RedWattleHog_110

RedWattleHog_111

RedWattleHog_112

RedWattleHog_113

RedWattleHog_114

RedWattleHog_115

RedWattleHog_116

RedWattleHog_117

RedWattleHog_118

RedWattleHog_119

RedWattleHog_120

RedWattleHog_121

RedWattleHog_122

RedWattleHog_123

RedWattleHog_124
(nucleoside deoxyribosyltransferase)

RedWattleHog_125

RedWattleHog_126

RedWattleHog_127

RedWattleHog_128

RedWattleHog_129

RedWattleHog_130
(helix-turn-helix DNA binding domain protein)

RedWattleHog_131

RedWattleHog_132

RedWattleHog_133

RedWattleHog_134

RedWattleHog_135

RedWattleHog_136

RedWattleHog_137

RedWattleHog_138

RedWattleHog_139
(lipoprotein)

RedWattleHog_140

RedWattleHog_141

RedWattleHog_142

RedWattleHog_143

RedWattleHog_144

RedWattleHog_145

RedWattleHog_146

RedWattleHog_147

RedWattleHog_148

RedWattleHog_149

RedWattleHog_150

RedWattleHog_151

RedWattleHog_152

RedWattleHog_153

RedWattleHog_154

RedWattleHog_155
(histidine triad nucleotide binding protein)

RedWattleHog_156

RedWattleHog_157

RedWattleHog_158

RedWattleHog_159

RedWattleHog_160

RedWattleHog_161

RedWattleHog_162
(hydrolase)

RedWattleHog_163

RedWattleHog_164

RedWattleHog_165

RedWattleHog_166

RedWattleHog_167

RedWattleHog_168

RedWattleHog_169

RedWattleHog_170

RedWattleHog_171
(WhiB family transcription factor)

RedWattleHog_172

RedWattleHog_173

RedWattleHog_174

RedWattleHog_175

RedWattleHog_176

RedWattleHog_177

RedWattleHog_178

RedWattleHog_179

RedWattleHog_180

RedWattleHog_181

RedWattleHog_182

RedWattleHog_183

RedWattleHog_184
(ThyX-like thymidylate synthase)

RedWattleHog_185

RedWattleHog_186

RedWattleHog_187

RedWattleHog_188

RedWattleHog_189

RedWattleHog_190

RedWattleHog_191

RedWattleHog_192

RedWattleHog_193

RedWattleHog_194

RedWattleHog_195

RedWattleHog_196

RedWattleHog_197
(peptidase)

RedWattleHog_198

RedWattleHog_199

RedWattleHog_200

RedWattleHog_201

RedWattleHog_202

RedWattleHog_203

RedWattleHog_204

RedWattleHog_205

RedWattleHog_206
(DNA methylase)

RedWattleHog_207
(helix-turn-helix DNA binding domain protein)

RedWattleHog_208

RedWattleHog_209

RedWattleHog_210

RedWattleHog_211

RedWattleHog_212
(lysin A)

RedWattleHog_213

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT521993
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 109
Pitt Freezer Box Grid# G6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload