| Detailed Information for Phage Rope | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Holden Sampson |
| Year Found | 2017 |
| Location Found | Helena, MT USA |
| Finding Institution | Montana Technological University |
| Program | Montana Tech Bringing Research Into the Classroom |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 46.5891 N, 112.0391 W Map |
| Discovery Notes | Adopted by Emily Kelly (Summer Pipeline 2019). Discovered at Helena High School as part of the Montana Tech BRIC program. Annotated at Montana Tech by Hannah Sparks in 2020 |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 622 |
| Genome length (bp) | 71003 |
| Character of genome ends | Circularly Permuted |
| GC Content | 56.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | R |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Helena High School |
| Annotation Status | In GenBank |
| Plaque Notes | Small pin prick sized plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRope_1 Rope_2 Rope_3 Rope_4 Rope_5 Rope_6 Rope_7 Rope_8 Rope_9 Rope_10 Rope_11 Rope_12 Rope_13 Rope_14 Rope_15 Rope_16 Rope_17 Rope_18 Rope_19 Rope_20 Rope_21 Rope_22 Rope_23 Rope_24 Rope_25 Rope_26 Rope_27 Rope_28 Rope_29 Rope_30 Rope_31 Rope_32 Rope_33 Rope_34 Rope_35 Rope_36 Rope_37 Rope_38 Rope_39 Rope_40 Rope_41 Rope_42 Rope_43 Rope_44 Rope_45 Rope_46 Rope_47 Rope_48 Rope_49 Rope_50 Rope_51 Rope_52 Rope_53 Rope_54 Rope_55 Rope_56 Rope_57 Rope_58 Rope_59 Rope_60 Rope_61 Rope_62 Rope_63 Rope_64 Rope_65 Rope_66 Rope_67 Rope_68 Rope_69 Rope_70 Rope_71 Rope_72 Rope_73 Rope_74 Rope_75 Rope_76 Rope_77 Rope_78 Rope_79 Rope_80 Rope_81 Rope_82 Rope_83 Rope_84 Rope_85 Rope_86 Rope_87 Rope_88 Rope_89 Rope_90 Rope_91 Rope_92 Rope_93 Rope_94 Rope_95 Rope_96 Rope_97 Rope_98 Rope_99 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT684602 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 130 |
| Pitt Freezer Box Grid# | C10 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
