| Detailed Information for Phage Scotia | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Kathleen Connolly |
| Year Found | 2024 |
| Location Found | Ottawa, Canada |
| Finding Institution | University of Ottawa |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 22°C |
| GPS Coordinates | 45.42136 N, 75.67582 W Map |
| Discovery Notes | Found beside a big rock in a public park behind our university soccer field. |
| Naming Notes | Named after the province I am from: Nova Scotia. Originally Scotia referred to Ireland but today is known as a classical name for Scotland. Ireland and Scotland are where my dad and moms families are from, respectively, so my phage name is a homage to my home and family history. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 3938 |
| Genome length (bp) | 40383 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGTCGGGGTA |
| GC Content | 67.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FO |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Ottawa |
| Annotation Status | QC Complete |
| Plaque Notes | Forms very small plaques that are slightly cloudy. |
| Number of Genes | 58 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewScotia_1 Scotia_2 Scotia_3 Scotia_4 Scotia_5 Scotia_6 Scotia_7 Scotia_8 Scotia_9 Scotia_10 Scotia_11 Scotia_12 Scotia_13 Scotia_14 Scotia_15 Scotia_16 Scotia_17 Scotia_18 Scotia_19 Scotia_20 Scotia_21 Scotia_22 Scotia_23 Scotia_24 Scotia_25 Scotia_26 Scotia_27 Scotia_28 Scotia_29 Scotia_30 Scotia_31 Scotia_32 Scotia_33 Scotia_34 Scotia_35 Scotia_36 Scotia_37 Scotia_38 Scotia_39 Scotia_40 Scotia_41 Scotia_42 Scotia_43 Scotia_44 Scotia_45 Scotia_46 Scotia_47 Scotia_48 Scotia_49 Scotia_50 Scotia_51 Scotia_52 Scotia_53 Scotia_54 Scotia_55 Scotia_56 Scotia_57 Scotia_58 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2 x 10^10 |
| Pitt Freezer Box# | 203 |
| Pitt Freezer Box Grid# | E2 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |