| Detailed Information for Phage Shiba | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Patrick Rimple |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.4473 N, 79.9538 W Map |
| Discovery Notes | Isolated from direct plate |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 1, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2058 |
| Genome length (bp) | 54204 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGACCT |
| GC Content | 51.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AW |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | plaques are 1-3 mm in size |
| Morphotype | Siphoviridae |
| Number of Genes | 86 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewShiba_1 Shiba_2 Shiba_3 Shiba_4 Shiba_5 Shiba_6 Shiba_7 Shiba_8 Shiba_9 Shiba_10 Shiba_11 Shiba_12 Shiba_13 Shiba_14 Shiba_15 Shiba_16 Shiba_17 Shiba_18 Shiba_19 Shiba_20 Shiba_21 Shiba_22 Shiba_23 Shiba_24 Shiba_25 Shiba_26 Shiba_27 Shiba_28 Shiba_29 Shiba_30 Shiba_31 Shiba_32 Shiba_33 Shiba_34 Shiba_35 Shiba_36 Shiba_37 Shiba_38 Shiba_39 Shiba_40 Shiba_41 Shiba_42 Shiba_43 Shiba_44 Shiba_45 Shiba_46 Shiba_47 Shiba_48 Shiba_49 Shiba_50 Shiba_51 Shiba_52 Shiba_53 Shiba_54 Shiba_55 Shiba_56 Shiba_57 Shiba_58 Shiba_59 Shiba_60 Shiba_61 Shiba_62 Shiba_63 Shiba_64 Shiba_65 Shiba_66 Shiba_67 Shiba_68 Shiba_69 Shiba_70 Shiba_71 Shiba_72 Shiba_73 Shiba_74 Shiba_75 Shiba_76 Shiba_77 Shiba_78 Shiba_79 Shiba_80 Shiba_81 Shiba_82 Shiba_83 Shiba_84 Shiba_85 Shiba_86 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN234180 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 6 |
| Pitt Freezer Box Grid# | C2 |
| Available Files | |
| Plaque Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |