Detailed Information for Phage Skitty | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Alexis Bernal |
Year Found | 2024 |
Location Found | West Lafayette, IN United States |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 28°C |
GPS Coordinates | 40.4214 N, 86.91457 W Map |
Discovery Notes | - Found at 2:34PM (8/28/2024) - 88F / 31C - 64% humidity - No precipitation within the last 24 hours - Soil was surrounded by plants and sticks - Soil as damp and paste-like - Partly shaded area - Found 2cm deep in soil |
Naming Notes | Skitty is the name of a pokemon and also the name of my cat because Skitty is a cat pokemon. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3659 |
Genome length (bp) | 39348 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | CCCTCCGGCTCT |
GC Content | 60.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FQ |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Purdue University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Morphotype | Siphoviridae |
Number of Genes | 81 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewSkitty_1 Skitty_2 Skitty_3 Skitty_4 Skitty_5 Skitty_6 Skitty_7 Skitty_8 Skitty_9 Skitty_10 Skitty_11 Skitty_12 Skitty_13 Skitty_14 Skitty_15 Skitty_16 Skitty_17 Skitty_18 Skitty_19 Skitty_20 Skitty_21 Skitty_22 Skitty_23 Skitty_24 Skitty_25 Skitty_26 Skitty_27 Skitty_28 Skitty_29 Skitty_30 Skitty_31 Skitty_32 Skitty_33 Skitty_34 Skitty_35 Skitty_36 Skitty_37 Skitty_38 Skitty_39 Skitty_40 Skitty_41 Skitty_42 Skitty_43 Skitty_44 Skitty_45 Skitty_46 Skitty_47 Skitty_48 Skitty_49 Skitty_50 Skitty_51 Skitty_52 Skitty_53 Skitty_54 Skitty_55 Skitty_56 Skitty_57 Skitty_58 Skitty_59 Skitty_60 Skitty_61 Skitty_62 Skitty_63 Skitty_64 Skitty_65 Skitty_66 Skitty_67 Skitty_68 Skitty_69 Skitty_70 Skitty_71 Skitty_72 Skitty_73 Skitty_74 Skitty_75 Skitty_76 Skitty_77 Skitty_78 Skitty_79 Skitty_80 Skitty_81 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |