Arthrobacter phage Sloopyjoe
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Sloopyjoe
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByJoselish De pool and Eric Bittinger
Year Found2021
Location FoundJersey City, NJ United States
Finding InstitutionAlliance University (formerly Nyack College)
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates40.716788 N, 74.035119 W Map
Discovery NotesI found my soil/ at 30 Montgomery St, jersey.

My soil looked darker than any soil I have ever seen/ I found it in a garden filled with plants
Naming NotesI named my phage Sloopyjoe because its a cool and unique name, also because I love food.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage2033
Genome length (bp)54511
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGACCT
GC Content51.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAW
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Plaque NotesThe plaques looked like little tiny bubbles , less than 1 millimeter and they were really clear and just a tiny bit cloudy
Number of Genes87
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Sloopyjoe_1

Sloopyjoe_2

Sloopyjoe_3
(HNH endonuclease)

Sloopyjoe_4
(endolysin)

Sloopyjoe_5

Sloopyjoe_6

Sloopyjoe_7

Sloopyjoe_8
(terminase)

Sloopyjoe_9

Sloopyjoe_10

Sloopyjoe_11

Sloopyjoe_12
(portal protein)

Sloopyjoe_13
(major capsid and protease fusion protein)

Sloopyjoe_14

Sloopyjoe_15
(tail terminator)

Sloopyjoe_16
(major tail protein)

Sloopyjoe_17

Sloopyjoe_18
(minor tail protein)

Sloopyjoe_19
(major tail protein)

Sloopyjoe_20

Sloopyjoe_21

Sloopyjoe_22

Sloopyjoe_23
(tape measure protein)

Sloopyjoe_24
(minor tail protein)

Sloopyjoe_25
(minor tail protein)

Sloopyjoe_26

Sloopyjoe_27
(minor tail protein)

Sloopyjoe_28

Sloopyjoe_29

Sloopyjoe_30
(holin)

Sloopyjoe_31

Sloopyjoe_32

Sloopyjoe_33

Sloopyjoe_34

Sloopyjoe_35

Sloopyjoe_36

Sloopyjoe_37

Sloopyjoe_38

Sloopyjoe_39

Sloopyjoe_40

Sloopyjoe_41

Sloopyjoe_42

Sloopyjoe_43

Sloopyjoe_44

Sloopyjoe_45

Sloopyjoe_46

Sloopyjoe_47

Sloopyjoe_48

Sloopyjoe_49

Sloopyjoe_50

Sloopyjoe_51

Sloopyjoe_52

Sloopyjoe_53

Sloopyjoe_54

Sloopyjoe_55

Sloopyjoe_56
(DNA primase/polymerase)

Sloopyjoe_57

Sloopyjoe_58

Sloopyjoe_59
(DNA binding protein)

Sloopyjoe_60

Sloopyjoe_61

Sloopyjoe_62

Sloopyjoe_63

Sloopyjoe_64
(ssDNA binding protein)

Sloopyjoe_65

Sloopyjoe_66

Sloopyjoe_67

Sloopyjoe_68

Sloopyjoe_69

Sloopyjoe_70

Sloopyjoe_71

Sloopyjoe_72
(HNH endonuclease)

Sloopyjoe_73

Sloopyjoe_74
(helicase)

Sloopyjoe_75

Sloopyjoe_76

Sloopyjoe_77
(HNH endonuclease)

Sloopyjoe_78

Sloopyjoe_79

Sloopyjoe_80

Sloopyjoe_81

Sloopyjoe_82

Sloopyjoe_83

Sloopyjoe_84
(VRR-Nuc domain protein)

Sloopyjoe_85
(RecB-like exonuclease/helicase)

Sloopyjoe_86
(helix-turn-helix DNA binding domain)

Sloopyjoe_87

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP910131
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 146
Pitt Freezer Box Grid# D2
Available Files
GenBank File for PhameratorDownload