Microbacterium phage Smilerella
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Detailed Information for Phage Smilerella | |
Discovery Information | |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Ella Ford |
Year Found | 2021 |
Location Found | Lincoln, NE USA |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 40.83853 N, 96.64983 W Map |
Discovery Notes | The soil sample was taken from under a tree |
Naming Notes | Smiler-Ella was my nickname growing up because I was such a smiley kid so I decided to combine the two words to create my phage name :) |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 16, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5967 |
Genome length (bp) | 17525 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 20 bases |
Overhang Sequence | CCCCGCCTTCGGCTCCAAGA |
GC Content | 68.3% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | GH |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
Click to View |
Annotating Institution | Nebraska Wesleyan University |
Annotation Status | Overdue (Expected completion by 5/1/2023) |
Number of Genes | 29 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewSmilerella_1 Smilerella_2 Smilerella_3 Smilerella_4 Smilerella_5 Smilerella_6 Smilerella_7 Smilerella_8 Smilerella_9 Smilerella_10 Smilerella_11 Smilerella_12 Smilerella_13 Smilerella_14 Smilerella_15 Smilerella_16 Smilerella_17 Smilerella_18 Smilerella_19 Smilerella_20 Smilerella_21 Smilerella_22 Smilerella_23 Smilerella_24 Smilerella_25 Smilerella_26 Smilerella_27 Smilerella_28 Smilerella_29 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |