Corynebacterium phage Stickynote
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Detailed Information for Phage Stickynote
Discovery Information
Isolation HostCorynebacterium vitaeruminis NCIB 9291
Found ByCameron McPhail
Year Found2016
Location FoundBirmingham, AL USA
Finding InstitutionUniversity of Alabama at Birmingham
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates33.543682 N, 86.779633 W Map
Discovery NotesIsolated from a sewage influent sample originating at the Jefferson County sewage treatment plant.
Naming NotesIt just kind of showed up because I use sticky notes on my bench, and it seemed to fit.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 7, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1947
Genome length (bp)67086
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCTACGGTGC
GC Content52.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEN
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Alabama at Birmingham
Annotation StatusIn GenBank
Number of Genes90
Number of tRNAs4
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Stickynote_1
(terminase small subunit)

Stickynote_2

Stickynote_3

Stickynote_4

Stickynote_5

Stickynote_6

Stickynote_7

Stickynote_8

Stickynote_9
(ThyX-like thymidylate synthase)

Stickynote_10
(MazG-like nucleotide pyrophosphohydrolase)

Stickynote_11

Stickynote_12

Stickynote_13
(HNH endonuclease)

Stickynote_14
(terminase large subunit)

Stickynote_15
(portal protein)

Stickynote_16
(capsid maturation protease)

Stickynote_17

Stickynote_18
(capsid decoration protein)

Stickynote_19
(major capsid protein)

Stickynote_20

Stickynote_21

Stickynote_22

Stickynote_23

Stickynote_24
(tail terminator)

Stickynote_25
(major tail protein)

Stickynote_26

Stickynote_27

Stickynote_28

Stickynote_29
(tail assembly chaperone)

Stickynote_30
(tail assembly chaperone)

Stickynote_31
(tape measure protein)

Stickynote_32
(minor tail protein)

Stickynote_33
(minor tail protein)

Stickynote_34

Stickynote_35

Stickynote_36

Stickynote_37

Stickynote_38
(lysin A)

Stickynote_39
(holin)

Stickynote_40
(DNA primase/polymerase)

Stickynote_41
(WhiB family transcription factor)

Stickynote_42

Stickynote_43

Stickynote_44

Stickynote_45
(DnaE-like DNA polymerase III subunit alpha)

Stickynote_46

Stickynote_47

Stickynote_48 — tRNA
(codon recognized: AGA)

Stickynote_49 — tRNA
(codon recognized: GGA)

Stickynote_50 — tRNA
(codon recognized: AGC)

Stickynote_51 — tRNA
(codon recognized: UGG)

Stickynote_52
(thioredoxin)

Stickynote_53

Stickynote_54
(AAA-ATPase)

Stickynote_55

Stickynote_56

Stickynote_57

Stickynote_58

Stickynote_59

Stickynote_60

Stickynote_61

Stickynote_62

Stickynote_63

Stickynote_64

Stickynote_65

Stickynote_66

Stickynote_67

Stickynote_68

Stickynote_69
(exonuclease)

Stickynote_70

Stickynote_71
(DNA helicase)

Stickynote_72
(ribonucleotide reductase)

Stickynote_73

Stickynote_74
(ribonucleotide reductase)

Stickynote_75

Stickynote_76

Stickynote_77

Stickynote_78

Stickynote_79

Stickynote_80

Stickynote_81
(pentapeptide repeat protein)

Stickynote_82

Stickynote_83

Stickynote_84

Stickynote_85

Stickynote_86

Stickynote_87

Stickynote_88

Stickynote_89

Stickynote_90

Stickynote_91

Stickynote_92

Stickynote_93

Stickynote_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK977700
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 10x10^9
Date of SEA Lysate Titering Oct 12, 2016
Pitt Freezer Box# 32
Pitt Freezer Box Grid# D2
Available Files
GenBank File for PhameratorDownload