| Detailed Information for Phage Tank | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Jen Menninger |
| Year Found | 2014 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | Saint Joseph's University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.993945 N, 75.239892 W Map |
| Discovery Notes | Sample gathered outside of a dorm building on the Saint Joseph's University campus. This area is a designated smoking area. The area was very dry. It was a sunny day-78 degrees. Took the sample off of the surface, it was a hard dry ground could not dig deep. |
| Naming Notes | My original sample failed many times so by the fourth time I gathered a new sample and it worked the first time so I named it tank-indestructible. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2522 |
| Genome length (bp) | 67592 |
| Character of genome ends | Direct Terminal Repeat |
| GC Content | 62.9% |
| Sequencing Notes | Appears to have one clearly defined end, and the other end is ambiguous. It does seem like there's a terminal repeat—as indicated by a coverage bump—even though there's no exact left end. So I selected a left end where the coverage bump begins to dissipate. The direct terminal repeat is ~589. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AP |
| Subcluster | AP1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 105 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTank_1 Tank_2 Tank_3 Tank_4 Tank_5 Tank_6 Tank_7 Tank_8 Tank_9 Tank_10 Tank_11 Tank_12 Tank_13 Tank_14 Tank_15 Tank_16 Tank_17 Tank_18 Tank_19 Tank_20 Tank_21 Tank_22 Tank_23 Tank_24 Tank_25 Tank_26 Tank_27 Tank_28 Tank_29 Tank_30 Tank_31 Tank_32 Tank_33 Tank_34 Tank_35 Tank_36 Tank_37 Tank_38 Tank_39 Tank_40 Tank_41 Tank_42 Tank_43 Tank_44 Tank_45 Tank_46 Tank_47 Tank_48 Tank_49 Tank_50 Tank_51 Tank_52 Tank_53 Tank_54 Tank_55 Tank_56 Tank_57 Tank_58 Tank_59 Tank_60 Tank_61 Tank_62 Tank_63 Tank_64 Tank_65 Tank_66 Tank_67 Tank_68 Tank_69 Tank_70 Tank_71 Tank_72 Tank_73 Tank_74 Tank_75 Tank_76 Tank_77 Tank_78 Tank_79 Tank_80 Tank_81 Tank_82 Tank_83 Tank_84 Tank_85 Tank_86 Tank_87 Tank_88 Tank_89 Tank_90 Tank_91 Tank_92 Tank_93 Tank_94 Tank_95 Tank_96 Tank_97 Tank_98 Tank_99 Tank_100 Tank_101 Tank_102 Tank_103 Tank_104 Tank_105 |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160669 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 148 |
| Pitt Freezer Box Grid# | C6 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
