| Detailed Information for Phage Tank | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Jen Menninger |
| Year Found | 2014 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | Saint Joseph's University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.993945 N, 75.239892 W Map |
| Discovery Notes | Sample gathered outside of a dorm building on the Saint Joseph's University campus. This area is a designated smoking area. The area was very dry. It was a sunny day-78 degrees. Took the sample off of the surface, it was a hard dry ground could not dig deep. |
| Naming Notes | My original sample failed many times so by the fourth time I gathered a new sample and it worked the first time so I named it tank-indestructible. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2522 |
| Genome length (bp) | 67592 |
| Character of genome ends | Direct Terminal Repeat |
| GC Content | 62.9% |
| Sequencing Notes | Appears to have one clearly defined end, and the other end is ambiguous. It does seem like there's a terminal repeat—as indicated by a coverage bump—even though there's no exact left end. So I selected a left end where the coverage bump begins to dissipate. The direct terminal repeat is ~589. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AP |
| Subcluster | AP1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewRanunculus (None) Rizwana (AP1) Tank (AP1) Wilde (AP1) Beagle (AP2) BetaFish (AP2) DogYard (AP2) Forrestell (AP2) Kubulix (AP2) MellowYellow (AP2) Nikan (AP2) NyleyClemson (AP2) Odyssey395 (AP2) Ollypop (AP2) PhuzzTulsa (AP2) Pointis (AP2) Popstraw (AP2) Pureglobe5 (AP2) RazzB (AP2) Ren19 (AP2) BruhMoment (AP3) AWGoat (AP4) SilentRX (AP4) |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 105 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTank_1 Tank_2 Tank_3 Tank_4 Tank_5 Tank_6 Tank_7 Tank_8 Tank_9 Tank_10 Tank_11 Tank_12 Tank_13 Tank_14 Tank_15 Tank_16 Tank_17 Tank_18 Tank_19 Tank_20 Tank_21 Tank_22 Tank_23 Tank_24 Tank_25 Tank_26 Tank_27 Tank_28 Tank_29 Tank_30 Tank_31 Tank_32 Tank_33 Tank_34 Tank_35 Tank_36 Tank_37 Tank_38 Tank_39 Tank_40 Tank_41 Tank_42 Tank_43 Tank_44 Tank_45 Tank_46 Tank_47 Tank_48 Tank_49 Tank_50 Tank_51 Tank_52 Tank_53 Tank_54 Tank_55 Tank_56 Tank_57 Tank_58 Tank_59 Tank_60 Tank_61 Tank_62 Tank_63 Tank_64 Tank_65 Tank_66 Tank_67 Tank_68 Tank_69 Tank_70 Tank_71 Tank_72 Tank_73 Tank_74 Tank_75 Tank_76 Tank_77 Tank_78 Tank_79 Tank_80 Tank_81 Tank_82 Tank_83 Tank_84 Tank_85 Tank_86 Tank_87 Tank_88 Tank_89 Tank_90 Tank_91 Tank_92 Tank_93 Tank_94 Tank_95 Tank_96 Tank_97 Tank_98 Tank_99 Tank_100 Tank_101 Tank_102 Tank_103 Tank_104 Tank_105 |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160669 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 148 |
| Pitt Freezer Box Grid# | C6 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
