| Detailed Information for Phage Taptic | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Emily Seier |
| Year Found | 2015 |
| Location Found | Northampton , PA USA |
| Finding Institution | Lehigh University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | -7°C |
| GPS Coordinates | 40.755 N, 74.0 W Map |
| Discovery Notes | Soil was taken from compost in grass area |
| Naming Notes | Taptic stands for Tonto, Avery, Pebbles, Tilly, Izzy, Clyde, after all of the pet names owned by the founder of Taptic. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 5, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 70 |
| Genome length (bp) | 60973 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | W |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are clear pinpricks, being only 0.1 mm to 0.2 mm that only are present after a 48 hour incubation and do not get any larger. |
| Morphotype | Siphoviridae |
| Number of Genes | 92 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTaptic_1 Taptic_2 Taptic_3 Taptic_4 Taptic_5 Taptic_6 Taptic_7 Taptic_8 Taptic_9 Taptic_10 Taptic_11 Taptic_12 Taptic_13 Taptic_14 Taptic_15 Taptic_16 Taptic_17 Taptic_18 Taptic_19 Taptic_20 Taptic_21 Taptic_22 Taptic_23 Taptic_24 Taptic_25 Taptic_26 Taptic_27 Taptic_28 Taptic_29 Taptic_30 Taptic_31 Taptic_32 Taptic_33 Taptic_34 Taptic_35 Taptic_36 Taptic_37 Taptic_38 Taptic_39 Taptic_40 Taptic_41 Taptic_42 Taptic_43 Taptic_44 Taptic_45 Taptic_46 Taptic_47 Taptic_48 Taptic_49 Taptic_50 Taptic_51 Taptic_52 Taptic_53 Taptic_54 Taptic_55 Taptic_56 Taptic_57 Taptic_58 Taptic_59 Taptic_60 Taptic_61 Taptic_62 Taptic_63 Taptic_64 Taptic_65 Taptic_66 Taptic_67 Taptic_68 Taptic_69 Taptic_70 Taptic_71 Taptic_72 — tRNA Taptic_73 Taptic_74 Taptic_75 Taptic_76 Taptic_77 Taptic_78 Taptic_79 Taptic_80 Taptic_81 Taptic_82 Taptic_83 Taptic_84 Taptic_85 Taptic_86 Taptic_87 Taptic_88 Taptic_89 Taptic_90 Taptic_91 Taptic_92 Taptic_93 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KY130461 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 4.0 x 10^11 |
| Date of SEA Lysate Titering | Mar 31, 2015 |
| Pitt Freezer Box# | 15 |
| Pitt Freezer Box Grid# | H3 |
| Available Files | |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |