| Detailed Information for Phage Towmatter |
| Discovery Information |
| Isolation Host | Gordonia terrae CAG3 |
| Found By | Nada Raef and Bryttan Adams |
| Year Found | 2024 |
| Location Found | Olathe, KS United States |
| Finding Institution | Kansas State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 77°C |
| GPS Coordinates | 38.867222 N, 94.754444 W Map |
| Discovery Notes | Dark soil from a tomato plant, in chunks, outside. |
| Naming Notes | The sample was taken from a tomato plant. Towmatter sounds like tomato |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 15, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 6070 |
| Genome length (bp) | 90671 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCAACGCTC |
| GC Content | 64.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DL |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Lysogeny confirmed. |
| Other Cluster Members |
|
| Annotating Institution | Kansas State University |
| Annotation Status | QC Complete |
| Plaque Notes | Smooth edges, clear plaques with bacterial inhibition. Various sizes. |
| Morphotype | Siphoviridae |
| Number of Genes | 163 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
7.3x10^8 |
| Pitt Freezer Box# |
204 |
| Pitt Freezer Box Grid# |
F12 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
