Gordonia phage Towmatter
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Detailed Information for Phage Towmatter | |
Discovery Information | |
Isolation Host | Gordonia terrae CAG3 |
Found By | Nada Raef and Bryttan Adams |
Year Found | 2024 |
Location Found | Olathe, KS United States |
Finding Institution | Kansas State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 77°C |
GPS Coordinates | 38.867222 N, 94.754444 W Map |
Discovery Notes | Dark soil from a tomato plant, in chunks, outside. |
Naming Notes | The sample was taken from a tomato plant. Towmatter sounds like tomato |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 15, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 6070 |
Genome length (bp) | 90671 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCAACGCTC |
GC Content | 64.8% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DL |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Lysogeny confirmed. |
Other Cluster Members | |
Annotating Institution | Kansas State University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | Smooth edges, clear plaques with bacterial inhibition. Various sizes. |
Morphotype | Siphoviridae |
Has been Phamerated? | No |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
SEA Lysate Titer | 7.3x10^8 |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |