Arthrobacter phage Zucker
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Detailed Information for Phage Zucker
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found BySamantha A. Marquette
Year Found2021
Location FoundRiver Falls, WI USA
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature29°C
GPS Coordinates44.852711 N, 92.616269 W Map
Discovery NotesThe soil was dry, the temperature was around 52 degrees Fahrenheit, and there was 86% humidity. The soil sample was collected from 3 inches deep by Grimm Hall, next to a little flower bed. The ground around the area was pretty dry soil and mulch with grass and an Oak Tree nearby.
Naming NotesIt was the name of my first dog.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 26, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1697
Genome length (bp)53491
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCCCCCGGGCAT
GC Content62.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFN
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusQC Complete
Plaque NotesThe plaques range in sizes but do not get larger than 1mm and the plaques are turbid with no halos.
Has been Phamerated?Yes
Gene List

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Zucker_1

Zucker_2
(terminase, small subunit)

Zucker_3
(terminase, large subunit)

Zucker_4
(portal protein)

Zucker_5

Zucker_6
(scaffolding protein)

Zucker_7
(capsid decoration protein, LamD-like)

Zucker_8
(major capsid protein)

Zucker_9

Zucker_10
(head-to-tail adaptor)

Zucker_11
(head-to-tail stopper)

Zucker_12

Zucker_13
(tail terminator)

Zucker_14
(major tail protein)

Zucker_15

Zucker_16
(tail assembly chaperone)

Zucker_17
(tail assembly chaperone)

Zucker_18
(tape measure protein)

Zucker_19
(minor tail protein)

Zucker_20
(minor tail protein)

Zucker_21
(minor tail protein)

Zucker_22

Zucker_23

Zucker_24
(endolysin)

Zucker_25

Zucker_26
(glycoside hydrolase)

Zucker_27

Zucker_28

Zucker_29
(tyrosine integrase)

Zucker_30

Zucker_31
(tyrosine integrase)

Zucker_32

Zucker_33

Zucker_34

Zucker_35

Zucker_36

Zucker_37

Zucker_38

Zucker_39

Zucker_40
(helix-turn-helix DNA binding domain)

Zucker_41
(helix-turn-helix DNA binding domain)

Zucker_42
(immunity repressor)

Zucker_43
(helix-turn-helix DNA binding domain)

Zucker_44
(excise)

Zucker_45

Zucker_46

Zucker_47

Zucker_48
(helix-turn-helix RNA binding domain)

Zucker_49

Zucker_50
(HNH endonuclease)

Zucker_51

Zucker_52

Zucker_53

Zucker_54

Zucker_55

Zucker_56

Zucker_57

Zucker_58

Zucker_59

Zucker_60

Zucker_61

Zucker_62
(HNH endonuclease)

Zucker_63

Zucker_64
(exonuclease)

Zucker_65

Zucker_66
(AAA-ATPase)

Zucker_67
(ssDNA binding protein)

Zucker_68
(membrane protein, Band-7-like)

Zucker_69
(glutaredoxin)

Zucker_70

Zucker_71
(DNA helicase)

Zucker_72
(DNA methyltransferase)

Zucker_73
(helix-turn-helix DNA binding domain)

Zucker_74
(DNA polymerase III sliding clamp (Beta))

Zucker_75

Zucker_76

Zucker_77
(DNA methyltransferase)

Zucker_78

Zucker_79

Zucker_80

Zucker_81

Zucker_82

Zucker_83
(HNH endonuclease)

Zucker_84
(RusA-like resolvase (endonuclease))

Zucker_85
(MazG-like nucleotide pyrophosphohydrolase)

Zucker_86

Zucker_87

Zucker_88

Zucker_89

Zucker_90

Zucker_91

Zucker_92

Zucker_93

Zucker_96

Zucker_97

Zucker_98
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 140
Pitt Freezer Box Grid# D11
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload