Microbacterium phage BabyDotz
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Detailed Information for Phage BabyDotz
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByEthan Dotzler, Jonathan Nyandu Kanyinda
Year Found2020
Location FoundMoorhead, MN Clay
Finding InstitutionMinnesota State University Moorhead
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature-2°C
GPS Coordinates46.8673 N, 96.762 W Map
Discovery NotesThis sample was collected on January 27th, 2020. The conditions of the day were cold, with a temperature of 28*F. This sample was collected between two Pine trees out on the Minnesota State University Moorhead Campus Mall, with the sample being comprised of dirt that was collected from approximately 1 inch below the visible surface.
Naming NotesWe gratefully dedicate the name of our phage to the wonderful discoverer, Ethan Dotzler. This is the first of two samples found in relatively the same area, and it is now the youngest member of the Dotzler Family.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 13, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1387
Genome length (bp)63076
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length217 bp
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionXavier University of Louisiana
Annotation StatusIn GenBank
Plaque NotesIt was one of a few visible plaques on a series of plates, and was further isolated after collecting samples from those plaques. The Plaques were clear, and were relatively round in shape, somewhat in-between the shapes of a circle and an oval, but not quite either of the two. After further investigation, and thanks to the TEM photos received, we were able to identify this phage as a Siphoviridae.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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BabyDotz_1

BabyDotz_2

BabyDotz_3

BabyDotz_4

BabyDotz_5

BabyDotz_6

BabyDotz_7

BabyDotz_8

BabyDotz_9
(DprA-like DNA processing chain A)

BabyDotz_10

BabyDotz_11

BabyDotz_12

BabyDotz_13
(helix-turn-helix DNA binding domain protein)

BabyDotz_14
(ribbon-helix-helix DNA binding domain protein)

BabyDotz_15
(helix-turn-helix DNA binding domain protein)

BabyDotz_16

BabyDotz_17

BabyDotz_18
(helix-turn-helix DNA binding domain protein)

BabyDotz_19
(terminase)

BabyDotz_20

BabyDotz_21
(portal protein)

BabyDotz_22

BabyDotz_23

BabyDotz_24
(major capsid protein)

BabyDotz_25

BabyDotz_26

BabyDotz_27
(major tail protein)

BabyDotz_28

BabyDotz_29
(phosphoesterase)

BabyDotz_30
(head-to-tail adaptor)

BabyDotz_31

BabyDotz_32

BabyDotz_33

BabyDotz_34

BabyDotz_35
(tape measure protein)

BabyDotz_36
(minor tail protein)

BabyDotz_37
(minor tail protein)

BabyDotz_38
(minor tail protein)

BabyDotz_39

BabyDotz_40

BabyDotz_41

BabyDotz_42

BabyDotz_43

BabyDotz_44
(endolysin)

BabyDotz_45

BabyDotz_46

BabyDotz_47

BabyDotz_48

BabyDotz_49

BabyDotz_50
(exonuclease)

BabyDotz_51

BabyDotz_52
(HNH endonuclease)

BabyDotz_53
(RuvC-like resolvase)

BabyDotz_54

BabyDotz_55

BabyDotz_56

BabyDotz_57
(MazG-like nucleotide pyrophosphohydrolase)

BabyDotz_58
(SSB protein)

BabyDotz_59

BabyDotz_60

BabyDotz_61

BabyDotz_62

BabyDotz_63

BabyDotz_64

BabyDotz_65

BabyDotz_66

BabyDotz_67
(DNA primase/helicase)

BabyDotz_68

BabyDotz_69
(ribbon helix-helix DNA binding protein)

BabyDotz_70

BabyDotz_71

BabyDotz_72

BabyDotz_73

BabyDotz_74

BabyDotz_75

BabyDotz_76

BabyDotz_77

BabyDotz_78

BabyDotz_79

BabyDotz_80

BabyDotz_81

BabyDotz_82

BabyDotz_83

BabyDotz_84

BabyDotz_85

BabyDotz_86

BabyDotz_87

BabyDotz_88

BabyDotz_89

BabyDotz_90

BabyDotz_91

BabyDotz_92

BabyDotz_93

BabyDotz_94

BabyDotz_95

BabyDotz_96

BabyDotz_97

BabyDotz_98

BabyDotz_99

BabyDotz_100

BabyDotz_101

BabyDotz_102

BabyDotz_103

BabyDotz_104

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR613478
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 6.67 X 10^10
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload