Detailed Information for Phage Captrips |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Former names | CapTrips |
Found By | Sean Mathews |
Year Found | 2023 |
Location Found | Omaha, NE United States of America |
Finding Institution | Metropolitan Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 41.171194 N, 96.032694 W Map |
Discovery Notes | was collected in a creek bed, inside of a public park with both wildlife and people engaging constantly, along with a residential area next to it. day of collection; 73 degrees, the day before it rained. |
Naming Notes | Captian Trips is a virus that is introduced in Stephan King's The Stand. where it is a Military Project that got released and subsequently killed 99% of the population. could also be called Tube Neck, or Super Flu. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 23, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 955 |
Genome length (bp) | 59629 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Metropolitan Community College |
Annotation Status | Being Annotated (Expected completion by 5/1/2024) |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |