Microbacterium phage Percival
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Percival
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByJohnathon Schiebel
Year Found2016
Location FoundCabot, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.796111 N, 79.759722 W Map
Discovery NotesWas found in soil at the edge of an empty garden taken on July 16th, 2016. Weather was humid and 86 degrees Fahrenheit. Sample was taken from 2 inches below the surface of the soil. Soil was dark brown and had some grass and root matter present.
Naming NotesThe second name of Albus Dumbledore, and also a knight in Arthurian legend
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 9, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage94
Genome length (bp)47364
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGAGGGGCAT
GC Content69.6%
Sequencing Notesat position 16501 bp 25% of reads contain a C instead of consensus T
Fasta file available?Yes: Download fasta file
Characterization
ClusterEH
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

Click to View

Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Percival_1
(terminase, small subunit)

Percival_2
(terminase, large subunit)

Percival_3
(portal protein)

Percival_4

Percival_5

Percival_6

Percival_7
(major capsid protein)

Percival_8
(head-to-tail connector complex protein)

Percival_9

Percival_10

Percival_11
(head-to-tail connector complex protein)

Percival_12
(major tail protein)

Percival_13
(tail assembly chaperone)

Percival_14
(tail assembly chaperone)

Percival_15
(tape measure protein)

Percival_16
(minor tail protein)

Percival_17
(minor tail protein)

Percival_18

Percival_19
(minor tail protein)

Percival_20
(minor tail protein)

Percival_21
(lysin A)

Percival_22

Percival_23
(membrane protein)

Percival_24

Percival_25
(deoxynucleoside monophosphate kinase)

Percival_26

Percival_27
(exonuclease)

Percival_28

Percival_29

Percival_30
(deoxycytidylate deaminase)

Percival_31

Percival_32

Percival_33
(HNH endonuclease)

Percival_34

Percival_35

Percival_36

Percival_37

Percival_38

Percival_39

Percival_40

Percival_41

Percival_42
(membrane protein)

Percival_43
(NrdH glutaredoxin)

Percival_44

Percival_45

Percival_46
(holliday junction resolvase)

Percival_47
(DNA primase)

Percival_48

Percival_49
(DNA polymerase I)

Percival_50

Percival_51
(DNA-directed RNA polymerase subunit alpha)

Percival_52
(SprT-like domain)

Percival_53

Percival_54

Percival_55

Percival_56
(membrane protein)

Percival_57

Percival_58

Percival_59
(integrase, (S-int))

Percival_60

Percival_61

Percival_62

Percival_63

Percival_64

Percival_65

Percival_66
(phosphoesterase)

Percival_67

Percival_68
(rtcB RNA ligase)

Percival_69
(helix-turn-helix DNA binding protein)

Percival_70

Percival_71

Percival_72

Percival_73

Percival_75
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271308
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 7
Pitt Freezer Box Grid# H9
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload