Microbacterium phage Zeta1847
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Detailed Information for Phage Zeta1847
Discovery Information
Isolation HostMicrobacterium paraoxydans NWU1
Found ByJordan Brozek
Year Found2015
Location FoundLincoln, NE United States
Finding InstitutionNebraska Wesleyan University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.84 N, 96.65 W Map
Discovery NotesPhage taken from under tree outside of Olin Science Hall
Naming NotesPhage named for the great Zeta Psi fraternity founded in 1847. The phage was taken near the fraternity.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 27, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage576
Genome length (bp)47921
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGTGCGGCAT
GC Content71.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterSingleton
Subcluster--
Cluster Life CycleUnknown
Lysogeny NotesZeta1847 does form a lysogen. When spotted on M. paraoxydans, there was clearing and subsequent mesa growth which was streaked and patched to confirm the lysogen.
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesSmall circle plaques.
Has been Phamerated?Yes
Gene List

Click to View

Zeta1847_1
(terminase small subunit)

Zeta1847_2
(terminase large subunit)

Zeta1847_3
(portal protein)

Zeta1847_4

Zeta1847_5
(scaffolding protein)

Zeta1847_6
(major capsid protein)

Zeta1847_7
(head-to-tail connector complex protein)

Zeta1847_8
(head-to-tail connector complex protein)

Zeta1847_9

Zeta1847_10
(head-to-tail connector complex protein)

Zeta1847_11
(major tail protein)

Zeta1847_12
(tail assembly chaperone)

Zeta1847_13
(tail assembly chaperone)

Zeta1847_14
(tape measure protein)

Zeta1847_15
(minor tail protein)

Zeta1847_16
(minor tail protein)

Zeta1847_17
(minor tail protein)

Zeta1847_18
(minor tail protein)

Zeta1847_19
(lysin A)

Zeta1847_20
(tail needle protein)

Zeta1847_21
(holin)

Zeta1847_22

Zeta1847_23
(deoxynucleoside monophosphate kinase)

Zeta1847_24

Zeta1847_25

Zeta1847_26
(exonuclease)

Zeta1847_27

Zeta1847_28

Zeta1847_29

Zeta1847_30
(endonuclease)

Zeta1847_31

Zeta1847_32

Zeta1847_33

Zeta1847_34

Zeta1847_35
(arsenate reductase)

Zeta1847_36

Zeta1847_37
(DNA helicase)

Zeta1847_38

Zeta1847_39

Zeta1847_40

Zeta1847_41

Zeta1847_42
(DNA-directed RNA polymerase subunit alpha)

Zeta1847_43

Zeta1847_44

Zeta1847_45
(SprT-like protease)

Zeta1847_46

Zeta1847_47
(DNA binding domain protein)

Zeta1847_48

Zeta1847_49

Zeta1847_50

Zeta1847_51

Zeta1847_52
(integrase)

Zeta1847_53

Zeta1847_54

Zeta1847_55

Zeta1847_56

Zeta1847_57

Zeta1847_58

Zeta1847_59

Zeta1847_60

Zeta1847_61

Zeta1847_62

Zeta1847_63

Zeta1847_64

Zeta1847_65

Zeta1847_66

Zeta1847_67

Zeta1847_68

Zeta1847_69

Zeta1847_70

Zeta1847_71

Zeta1847_72

Zeta1847_73

Zeta1847_74

Zeta1847_76
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH271320
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 27
Pitt Freezer Box Grid# C6
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload