Gordonia phage SketchMex
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Detailed Information for Phage SketchMex
Discovery Information
Isolation HostGordonia terrae 3612
Found ByGracie Jones, Beau Penningtion, Rachel David
Year Found2017
Location FoundArkadelphia, AR USA
Finding InstitutionOuachita Baptist University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.1431 N, 93.0827 W Map
Naming NotesNamed based on location of soil sample
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 6, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Genome length (bp)45847
Character of genome endsUnknown
Overhang Length10 bases
Overhang SequenceCGGTAGGCTT
GC Content60.5%
Sequencing NotesWas sequenced as a deliberately mixed sample along with DelRio.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCT
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesPlaques are very small and cloudy with undefined edges
Has been Phamerated?Yes
Gene List

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SketchMex_1

SketchMex_2

SketchMex_3
(terminase)

SketchMex_4
(portal protein)

SketchMex_5
(capsid maturation protease)

SketchMex_6
(scaffolding protein)

SketchMex_7
(major capsid protein)

SketchMex_8
(head-to-tail connector complex protein)

SketchMex_9
(head-to-tail connector complex protein)

SketchMex_10
(head-to-tail connector complex protein)

SketchMex_11
(head-to-tail connector complex protein)

SketchMex_12
(major tail protein)

SketchMex_13
(tail assembly chaperone)

SketchMex_14
(tail assembly chaperone)

SketchMex_15
(tape measure protein)

SketchMex_16
(minor tail protein)

SketchMex_17
(minor tail protein)

SketchMex_18
(minor tail protein)

SketchMex_19
(lysin A, L-Ala-D-Glu peptidase domain)

SketchMex_20
(lysin A, glycosyl hydrolase domain)

SketchMex_21
(membrane protein)

SketchMex_22
(membrane protein)

SketchMex_23

SketchMex_24

SketchMex_25

SketchMex_26
(tail fiber protein)

SketchMex_27

SketchMex_28

SketchMex_29

SketchMex_30

SketchMex_31
(MerR-like HTH DNA binding protein)

SketchMex_32

SketchMex_33
(MerR-like HTH DNA binding protein)

SketchMex_34

SketchMex_35

SketchMex_36
(RusA-like resolvase)

SketchMex_37

SketchMex_38

SketchMex_39

SketchMex_40
(RecA-like DNA recombinase)

SketchMex_41
(DNA helicase)

SketchMex_42

SketchMex_43
(DNA polymerase I)

SketchMex_44
(nucleoside deaminase)

SketchMex_45

SketchMex_46
(lysin B)

SketchMex_47

SketchMex_48
(ThyX-like thymidylate synthase)

SketchMex_49

SketchMex_50

SketchMex_51
(nucleotide pyrophosphohydrolase)

SketchMex_52
(polynucleotide kinase)

SketchMex_53
(DNA helicase)

SketchMex_54

SketchMex_55

SketchMex_56

SketchMex_57

SketchMex_58
(RecA-like DNA recombinase)

SketchMex_59

SketchMex_60

SketchMex_61

SketchMex_62

SketchMex_63

SketchMex_64

SketchMex_65

SketchMex_66

SketchMex_67

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH450132
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.6x10^8 pfu/ml
Pitt Freezer Box# 48
Pitt Freezer Box Grid# F6
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload