| Detailed Information for Phage Vordorf | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Jit Mukerji, Justin Brewer |
| Year Found | 2021 |
| Location Found | Charlestown, IN United States |
| Finding Institution | Indiana University-Southeast |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 38.46438 N, 85.667301 W Map |
| Discovery Notes | Soil was acquired from backyard in Charlestown, IN. Soil was dark and moist and was clumpy. |
| Naming Notes | We named it by combining the names of two different instruments that we used throughout our project. Our full name came from a vortex and a centrifuge called eppendorf. So combined it was vortex eppendorf but we shortened it to Vordorf. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 26, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 4391 |
| Genome length (bp) | 41646 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCGGGGGA |
| GC Content | 67.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DT |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Indiana University-Southeast |
| Annotation Status | Being Annotated (Expected completion by 10/26/2024) |
| Plaque Notes | Fairly round and cloudy. Size was consistent throughout.0.5 to 1 mm in size. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewVordorf_Draft_1 Vordorf_Draft_2 Vordorf_Draft_3 Vordorf_Draft_4 Vordorf_Draft_5 Vordorf_Draft_6 Vordorf_Draft_7 Vordorf_Draft_8 Vordorf_Draft_9 Vordorf_Draft_10 Vordorf_Draft_11 Vordorf_Draft_12 Vordorf_Draft_13 Vordorf_Draft_14 Vordorf_Draft_15 Vordorf_Draft_16 Vordorf_Draft_17 Vordorf_Draft_18 Vordorf_Draft_19 Vordorf_Draft_20 Vordorf_Draft_21 Vordorf_Draft_22 Vordorf_Draft_23 Vordorf_Draft_24 Vordorf_Draft_25 Vordorf_Draft_26 Vordorf_Draft_27 Vordorf_Draft_28 Vordorf_Draft_29 Vordorf_Draft_30 Vordorf_Draft_31 Vordorf_Draft_32 Vordorf_Draft_33 Vordorf_Draft_34 Vordorf_Draft_35 Vordorf_Draft_36 Vordorf_Draft_37 Vordorf_Draft_38 Vordorf_Draft_39 Vordorf_Draft_40 Vordorf_Draft_41 Vordorf_Draft_42 Vordorf_Draft_43 Vordorf_Draft_44 Vordorf_Draft_45 Vordorf_Draft_46 Vordorf_Draft_47 Vordorf_Draft_48 Vordorf_Draft_49 Vordorf_Draft_50 Vordorf_Draft_51 Vordorf_Draft_52 Vordorf_Draft_53 Vordorf_Draft_54 Vordorf_Draft_55 Vordorf_Draft_56 Vordorf_Draft_57 Vordorf_Draft_58 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 139 |
| Pitt Freezer Box Grid# | F4 |