Detailed Information for Phage AbbeyMikolon |
Discovery Information |
Isolation Host | Streptomyces lividans JI 1326 |
Found By | Abigail Mikolon |
Year Found | 2013 |
Location Found | Wilkes-Barre, PA USA |
Finding Institution | Wilkes University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 41.244625 N, 75.88789 W Map |
Discovery Notes | In soil surrounded by leaves |
Naming Notes | After my name :) |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 14, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3908 |
Genome length (bp) | 42551 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGGCAGGGA |
End Determination Notes | Buildup of reads around 9 bp in between region. |
GC Content | 66.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BL |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | All plaques are similar in size being quite large, and also they are all temperate meaning their genome is replicated with the host's genome causing a cloudy appearance within the plaque |
Morphotype | Siphoviridae |
Number of Genes | 59 |
Number of tRNAs | 5 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG593800 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
124 |
Pitt Freezer Box Grid# |
F1 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |