Streptomyces phage AbbeyMikolon
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Detailed Information for Phage AbbeyMikolon
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByAbigail Mikolon
Year Found2013
Location FoundWilkes-Barre, PA USA
Finding InstitutionWilkes University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates41.244625 N, 75.88789 W Map
Discovery NotesIn soil surrounded by leaves
Naming NotesAfter my name :)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3908
Genome length (bp)42551
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGGCAGGGA
End Determination NotesBuildup of reads around 9 bp in between region.
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBL
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members

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Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesAll plaques are similar in size being quite large, and also they are all temperate meaning their genome is replicated with the host's genome causing a cloudy appearance within the plaque
MorphotypeSiphoviridae
Number of Genes59
Number of tRNAs5
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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AbbeyMikolon_1
(terminase small subunit)

AbbeyMikolon_2
(terminase large subunit)

AbbeyMikolon_3
(portal protein)

AbbeyMikolon_4
(capsid maturation protease)

AbbeyMikolon_5
(scaffolding protein)

AbbeyMikolon_6
(major capsid protein)

AbbeyMikolon_7

AbbeyMikolon_8
(head-to-tail connector complex protein)

AbbeyMikolon_9
(head-to-tail connector complex protein)

AbbeyMikolon_10

AbbeyMikolon_11
(head-to-tail connector complex protein)

AbbeyMikolon_12
(major tail protein)

AbbeyMikolon_13
(tail assembly chaperone)

AbbeyMikolon_14
(tail assembly chaperone)

AbbeyMikolon_15
(tape measure protein)

AbbeyMikolon_16

AbbeyMikolon_17

AbbeyMikolon_18
(minor tail protein)

AbbeyMikolon_19

AbbeyMikolon_20

AbbeyMikolon_21
(lysin)

AbbeyMikolon_22

AbbeyMikolon_23

AbbeyMikolon_24
(deoxynucleoside monophosphate kinase)

AbbeyMikolon_25

AbbeyMikolon_26
(immunity repressor)

AbbeyMikolon_27

AbbeyMikolon_28

AbbeyMikolon_29

AbbeyMikolon_30

AbbeyMikolon_31
(recombination directionality factor)

AbbeyMikolon_32

AbbeyMikolon_33

AbbeyMikolon_34

AbbeyMikolon_35

AbbeyMikolon_36

AbbeyMikolon_37

AbbeyMikolon_38

AbbeyMikolon_39

AbbeyMikolon_40

AbbeyMikolon_41
(DNA primase)

AbbeyMikolon_42

AbbeyMikolon_43
(DNA methyltransferase)

AbbeyMikolon_44
(DNA polymerase I)

AbbeyMikolon_45

AbbeyMikolon_46

AbbeyMikolon_47

AbbeyMikolon_48

AbbeyMikolon_49

AbbeyMikolon_50

AbbeyMikolon_51

AbbeyMikolon_52 — tRNA

AbbeyMikolon_53

AbbeyMikolon_54

AbbeyMikolon_55

AbbeyMikolon_56

AbbeyMikolon_57
(integrase)

AbbeyMikolon_58

AbbeyMikolon_59 — tRNA
(tRNA Thr/Tyr)

AbbeyMikolon_60 — tRNA

AbbeyMikolon_61 — tRNA
(tRNA Gly/Trp)

AbbeyMikolon_62 — tRNA

AbbeyMikolon_63
(HNH endonuclease)

AbbeyMikolon_64

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG593800
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# F1
Available Files
EM PictureDownload
GenBank File for PhameratorDownload