Detailed Information for Phage Aphelion |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Yessica Bonilla |
Year Found | 2016 |
Location Found | Williamsburg, VA USA |
Finding Institution | College of William & Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 37.270645 N, 76.713451 W Map |
Discovery Notes | Found on October 3rd, 2016, 2:50 pm, 73°F (22.2°C). Crim Dell Creek, depth of 2 inches. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 137 |
Genome length (bp) | 93276 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 19 bases |
Overhang Sequence | CGCGACGCTC |
GC Content | 61.9% |
Sequencing Notes | Mixed population, approximately 15% of reads blast to Cluster CT |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CQ |
Subcluster | CQ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Universidad Autónoma de Nuevo León |
Annotation Status | In GenBank |
Plaque Notes | numerous turbid plaques of small diameter distributed across the plate |
Morphotype | Siphoviridae |
Number of Genes | 176 |
Number of tRNAs | 7 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK376959 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
121 |
Pitt Freezer Box Grid# |
E7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |