Detailed Information for Phage Bachita |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Carlos Guerrero |
Year Found | 2012 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.444800 N, 79.952700 W Map |
Discovery Notes | Isolated from mud containing decomposing leaves |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 7, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent |
Approximate Shotgun Coverage | 178 |
Sanger Finishing Reactions | 7 |
Genome length (bp) | 93843 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCGACGCTC |
End Determination Notes | Read buildups and Sanger reads. |
GC Content | 61.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CQ |
Subcluster | CQ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 182 |
Number of tRNAs | 8 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU998247 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |