BLAST and GeneMark available upon entering GPS coordinates
| Detailed Information for Phage BackstagePass | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | A Kancha, I Lewandowski, J Ames, H Reilly |
| Year Found | 2022 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | Unavailable |
| Naming Notes | We wanted something that incorporated "phage" but without the actual word in it. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 4, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 476 |
| Genome length (bp) | 46223 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCCGCGGTA |
| GC Content | 66.8% |
| Fasta file available? | Available upon entering GPS coordinates |
| Characterization | |
| Cluster | DB |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Overdue (Expected completion by 2/4/2024) |
| Plaque Notes | ten fold plate and there are medium sized clearings. |
| Number of Genes | 71 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewBackstagePass_1 BackstagePass_2 BackstagePass_3 BackstagePass_4 BackstagePass_5 BackstagePass_6 BackstagePass_7 BackstagePass_8 BackstagePass_9 BackstagePass_10 BackstagePass_11 BackstagePass_12 BackstagePass_13 BackstagePass_14 BackstagePass_15 BackstagePass_16 BackstagePass_17 BackstagePass_18 BackstagePass_19 BackstagePass_20 BackstagePass_21 BackstagePass_22 BackstagePass_23 BackstagePass_24 BackstagePass_25 BackstagePass_26 BackstagePass_27 BackstagePass_28 BackstagePass_29 BackstagePass_30 BackstagePass_31 BackstagePass_32 BackstagePass_33 BackstagePass_34 — tRNA BackstagePass_35 BackstagePass_36 BackstagePass_37 BackstagePass_38 BackstagePass_39 BackstagePass_40 BackstagePass_41 BackstagePass_42 BackstagePass_43 BackstagePass_44 BackstagePass_45 BackstagePass_46 BackstagePass_47 BackstagePass_48 BackstagePass_49 BackstagePass_50 BackstagePass_51 BackstagePass_52 BackstagePass_53 BackstagePass_54 BackstagePass_55 BackstagePass_56 BackstagePass_57 BackstagePass_58 BackstagePass_59 BackstagePass_60 BackstagePass_61 BackstagePass_62 BackstagePass_63 BackstagePass_64 BackstagePass_65 BackstagePass_66 BackstagePass_67 BackstagePass_68 BackstagePass_69 BackstagePass_70 BackstagePass_71 BackstagePass_72 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 159 |
| Pitt Freezer Box Grid# | D11 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
