Gordonia phage Doggs
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Detailed Information for Phage Doggs
Discovery Information
Isolation HostGordonia terrae 3612
Found ByErin Bogler, Dylan Leonard
Year Found2019
Location FoundCanonsburg, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.263139, -80.192528 Map
Discovery NotesGround was dry because of high temps and little rain. Dirt came from surface level near shrubs and flowers. Soil was kept in the refrigerator from the time is was picked top until it was used. Small animals like rabbits, moles, birds and bugs live near this soil.
Naming NotesName was obtained as a combination of lab partners names.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1118
Genome length (bp)45384
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCCCGCGGTA
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDQ
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

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Annotating InstitutionUniversity of South Florida
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque Notes55 nm capsid diameter and 310 nm tail length.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 6.67 x 10^11
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload