Gordonia phage Banquo
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Detailed Information for Phage Banquo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByClaudio L Miro
Year Found2016
Location FoundCharleston, SC USA
Finding InstitutionCollege of Charleston
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates32.782917 N, 79.945389 W Map
Discovery NotesFound under tall grass where the dirt was mostly free of rocks and organic material. It was retrieved at a humidity of 71% and a temperature of 84 degrees.
Naming NotesSince this Phage was found in the dirt of an abandoned house the name Banquo was chosen as it was the name of the ghost in Macbeth.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 9, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage61
Genome length (bp)43668
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceTCCGGGCCGGTA
GC Content65.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCU
SubclusterCU1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNHTI Concords Community College
Annotation StatusIn GenBank
Number of Genes74
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Banquo_1

Banquo_2

Banquo_3

Banquo_4

Banquo_5

Banquo_6

Banquo_7

Banquo_8

Banquo_9
(lysin B)

Banquo_10
(terminase small subunit)

Banquo_11
(terminase large subunit)

Banquo_12
(portal protein)

Banquo_13
(capsid maturation protease)

Banquo_14
(major capsid protein)

Banquo_15

Banquo_16
(head-to-tail adaptor)

Banquo_17
(head-to-tail stopper)

Banquo_18

Banquo_19

Banquo_20
(tail terminator)

Banquo_21
(major tail protein)

Banquo_22
(tail assembly chaperone)

Banquo_23
(tail assembly chaperone)

Banquo_24
(tape measure protein)

Banquo_25
(minor tail protein)

Banquo_26
(minor tail protein)

Banquo_27
(lysin A)

Banquo_28
(holin)

Banquo_29

Banquo_30
(minor tail protein)

Banquo_31
(minor tail protein)

Banquo_32
(minor tail protein)

Banquo_33 — tRNA
(tRNA-Lys(ttt))

Banquo_34
(helix-turn-helix DNA-binding domain protein)

Banquo_35

Banquo_36

Banquo_37
(tyrosine integrase)

Banquo_38

Banquo_39
(immunity repressor)

Banquo_40
(helix-turn-helix DNA-binding domain protein)

Banquo_41
(helix-turn-helix DNA-binding domain protein)

Banquo_42

Banquo_43

Banquo_44

Banquo_45
(Cas4 family exonuclease)

Banquo_46

Banquo_47
(ERF family ssDNA binding protein)

Banquo_48

Banquo_49

Banquo_50
(HNH endonuclease)

Banquo_51
(helix-turn-helix DNA-binding domain protein)

Banquo_52
(DnaB-like dsDNA helicase)

Banquo_53
(ssDNA binding protein)

Banquo_54

Banquo_55

Banquo_56
(holliday junction resolvase)

Banquo_57

Banquo_58

Banquo_59

Banquo_60
(helix-turn-helix DNA-binding domain protein)

Banquo_61

Banquo_62
(NrdH-like glutaredoxin)

Banquo_63
(HNH endonuclease)

Banquo_64

Banquo_65
(MRE11 double-strand break endo/exonuclease)

Banquo_66

Banquo_67

Banquo_68

Banquo_69
(nucleoside deoxyribosyltransferase)

Banquo_70
(ribbon-helix-helix DNA binding domain protein)

Banquo_71

Banquo_72

Banquo_73

Banquo_74

Banquo_75

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON260826
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload