Streptomyces phage Bogota
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Detailed Information for Phage Bogota
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found BySara McCown
Year Found2021
Location FoundDenton, TX United States
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates33.219166 N, 97.160091 W Map
Discovery NotesThe weather was partly cloudy with slightly humid air. The soil was 5 inches away from a sidewalk and I dug about an inch in the ground. The soil was moist and had a mixture of a brown reddish and dark brown color. I dug in between the weeds with a plastic spoon and put the sample in a plastic bag.
Naming NotesThe name came from the tv show Money Heist. Bogota is one of my favorite characters.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 21, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1604
Genome length (bp)54184
Character of genome endsCircularly Permuted
GC Content68.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBH
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of North Texas
Annotation StatusBeing Annotated (Expected completion by 5/1/2023)
Plaque NotesPlaques around 1 mm, cloudy pinpoint. Lysogenic life cycle
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Published in PaperHughes LE et al. 2018, Genome Announcements: Eight Genome Sequences of Cluster BE1 Phages That Infect Streptomyces Species.
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.0*10^8
Pitt Freezer Box# 143
Pitt Freezer Box Grid# B9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload