Detailed Information for Phage JackieB |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Richard Hale |
Year Found | 2012 |
Location Found | Fort Worth, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 32.862146 N, 97.295193 W Map |
Discovery Notes | Soil collected from a compost pile in my backyard. Compost consisted of leaves, trimmings, and vegetable matter that had been turned with soil. Pile about 1 year old. Dark and fragrant. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 15, 2014 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 386 |
Genome length (bp) | 54912 |
Character of genome ends | Circularly Permuted |
End Determination Notes | No buildups of reads were observed in the Ion Torrent data. The terminase is similar to that of Actinoplanes phage phiAsp2, which is reported to be circularly permuted. |
GC Content | 68.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BH |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 82 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH229863 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
70 |
Pitt Freezer Box Grid# |
F5 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |