| Detailed Information for Phage Candle | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Emma Ryan |
| Year Found | 2018 |
| Location Found | Northport, AL USA |
| Finding Institution | University of West Alabama |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 33.259722 N, 87.610556 W Map |
| Discovery Notes | I found this phage's soil sample at the base of an okra stalk. The soil was mostly topsoil, recently tilled for planting the okra and very dry. Outside, it was very hot. I recorded 87 degrees Fahrenheit. |
| Naming Notes | Upon isolating the phage, I noticed that there were halos surrounding each individual plaque. These halos resemble the light orb that surround a lit candle in a dark room. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 28, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 564 |
| Genome length (bp) | 71390 |
| Character of genome ends | Circularly Permuted |
| GC Content | 56.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | R |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of West Alabama |
| Annotation Status | In GenBank |
| Plaque Notes | The diluted plaques are very small, pinpricked-size. There are small halos surrounding each individual plaque, extending a few millimeters out from the center. |
| Morphotype | Siphoviridae |
| Number of Genes | 95 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCandle_1 Candle_2 Candle_3 Candle_4 Candle_5 Candle_6 Candle_7 Candle_8 Candle_9 Candle_10 Candle_11 Candle_12 Candle_13 Candle_14 Candle_15 Candle_16 Candle_17 Candle_18 Candle_19 Candle_20 Candle_21 Candle_22 Candle_23 Candle_24 Candle_25 Candle_26 Candle_27 Candle_28 Candle_29 Candle_30 Candle_31 Candle_32 Candle_33 Candle_34 Candle_35 Candle_36 Candle_37 Candle_38 Candle_39 Candle_40 Candle_41 Candle_42 Candle_43 Candle_44 Candle_45 Candle_46 Candle_47 Candle_48 Candle_49 Candle_50 Candle_51 Candle_52 Candle_53 Candle_54 Candle_55 Candle_56 Candle_57 Candle_58 Candle_59 Candle_60 Candle_61 Candle_62 Candle_63 Candle_64 Candle_65 Candle_66 Candle_67 Candle_68 Candle_69 Candle_70 Candle_71 Candle_72 Candle_73 Candle_74 Candle_75 Candle_76 Candle_77 Candle_78 Candle_79 Candle_80 Candle_81 Candle_82 Candle_83 Candle_84 Candle_85 Candle_86 Candle_87 Candle_88 Candle_89 Candle_90 Candle_91 Candle_92 Candle_93 Candle_94 Candle_95 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK757446 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 85 |
| Pitt Freezer Box Grid# | E9 |
| Available Files | |
| GenBank File for Phamerator | Download |