Gordonia phage Cardigan
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Cardigan
Discovery Information
Isolation HostGordonia terrae 3612
Found ByE. Fifo, A. Ravishankar, J. Deleon, B. Glasser
Year Found2022
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.2627 N, 79.5738 W Map
Naming NotesOur phage name is based off of Taylor Swift's song off of her album "folklore", "cardigan".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 4, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage552
Genome length (bp)101418
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCGAAGCTC
GC Content59.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDD
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusOverdue (Expected completion by 9/2/2024)
Number of Genes205
Number of tRNAs7
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Cardigan_1

Cardigan_2

Cardigan_3

Cardigan_4

Cardigan_5

Cardigan_6

Cardigan_7

Cardigan_8

Cardigan_9

Cardigan_10

Cardigan_11

Cardigan_12

Cardigan_13

Cardigan_14

Cardigan_15

Cardigan_16

Cardigan_17

Cardigan_18

Cardigan_19 — tRNA
(gp19)

Cardigan_20 — tRNA
(gp20)

Cardigan_21 — tRNA
(gp21)

Cardigan_22 — tRNA
(gp22)

Cardigan_23 — tRNA
(gp23)

Cardigan_24 — tRNA
(gp24)

Cardigan_25 — tRNA
(gp25)

Cardigan_26

Cardigan_27

Cardigan_28

Cardigan_29

Cardigan_30

Cardigan_31

Cardigan_32

Cardigan_33

Cardigan_34

Cardigan_35

Cardigan_36

Cardigan_37

Cardigan_38

Cardigan_39

Cardigan_40

Cardigan_41

Cardigan_42

Cardigan_43

Cardigan_44

Cardigan_45

Cardigan_46

Cardigan_47

Cardigan_48

Cardigan_49

Cardigan_50

Cardigan_51

Cardigan_52

Cardigan_53

Cardigan_54

Cardigan_55

Cardigan_56

Cardigan_57

Cardigan_58

Cardigan_59

Cardigan_60

Cardigan_61

Cardigan_62

Cardigan_63

Cardigan_64

Cardigan_65

Cardigan_66

Cardigan_67

Cardigan_68

Cardigan_69

Cardigan_70

Cardigan_71

Cardigan_72

Cardigan_73

Cardigan_74

Cardigan_75

Cardigan_76

Cardigan_77

Cardigan_78

Cardigan_79

Cardigan_80

Cardigan_81

Cardigan_82

Cardigan_83

Cardigan_84

Cardigan_85

Cardigan_86

Cardigan_87

Cardigan_88

Cardigan_89

Cardigan_90

Cardigan_91

Cardigan_92

Cardigan_93

Cardigan_94

Cardigan_95

Cardigan_96

Cardigan_97

Cardigan_98

Cardigan_99

Cardigan_100

Cardigan_101

Cardigan_102

Cardigan_103

Cardigan_104

Cardigan_105

Cardigan_106

Cardigan_107

Cardigan_108

Cardigan_109

Cardigan_110

Cardigan_111

Cardigan_112

Cardigan_113

Cardigan_114

Cardigan_115

Cardigan_116

Cardigan_117

Cardigan_118

Cardigan_119

Cardigan_120

Cardigan_121

Cardigan_122

Cardigan_123

Cardigan_124

Cardigan_125

Cardigan_126

Cardigan_127

Cardigan_128

Cardigan_129

Cardigan_130

Cardigan_131

Cardigan_132

Cardigan_133

Cardigan_134

Cardigan_135

Cardigan_136

Cardigan_137

Cardigan_138

Cardigan_139

Cardigan_140

Cardigan_141

Cardigan_142

Cardigan_143

Cardigan_144

Cardigan_145

Cardigan_146

Cardigan_147

Cardigan_148

Cardigan_149

Cardigan_150

Cardigan_151

Cardigan_152

Cardigan_153

Cardigan_154

Cardigan_155

Cardigan_156

Cardigan_157

Cardigan_158

Cardigan_159

Cardigan_160

Cardigan_161

Cardigan_162

Cardigan_163

Cardigan_164

Cardigan_165

Cardigan_166

Cardigan_167

Cardigan_168

Cardigan_169

Cardigan_170

Cardigan_171

Cardigan_172

Cardigan_173

Cardigan_174

Cardigan_175

Cardigan_176

Cardigan_177

Cardigan_178

Cardigan_179

Cardigan_180

Cardigan_181

Cardigan_182

Cardigan_183

Cardigan_184

Cardigan_185

Cardigan_186

Cardigan_187

Cardigan_188

Cardigan_189

Cardigan_190

Cardigan_191

Cardigan_192

Cardigan_193

Cardigan_194

Cardigan_195

Cardigan_196

Cardigan_197

Cardigan_198

Cardigan_199

Cardigan_200

Cardigan_201

Cardigan_202

Cardigan_203

Cardigan_204

Cardigan_205

Cardigan_206

Cardigan_207

Cardigan_208

Cardigan_209

Cardigan_210

Cardigan_211

Cardigan_212

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 159
Pitt Freezer Box Grid# E5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload