| Detailed Information for Phage Cardigan |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | E. Fifo, A. Ravishankar, J. Deleon, B. Glasser |
| Year Found | 2022 |
| Location Found | Pittsburgh, PA United States |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.2627 N, 79.5738 W Map |
| Naming Notes | Our phage name is based off of Taylor Swift's song off of her album "folklore", "cardigan". |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 4, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 552 |
| Genome length (bp) | 101418 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGCGAAGCTC |
| GC Content | 59.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DD |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Overdue (Expected completion by 6/13/2025) |
| Number of Genes | 205 |
| Number of tRNAs | 7 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
159 |
| Pitt Freezer Box Grid# |
E5 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
